RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 SERPINB4P48594 390 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 ACSM2AQ08AH3 577 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 C2orf80Q0P641 193 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 KLHL26Q53HC5 615 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 SYT14P1Q58G82 188 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 GRTP1Q5TC63 336 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 SAXO2Q658L1 398 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 ACSM2BQ68CK6 577 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 BRICD5Q6PL45 260 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 C17orf107Q6ZR85 190 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 MYPOPQ86VE0 399 aaPredicted RBP11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 ZBED8Q8IZ13 594 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 ARL8AQ96BM9 186 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 ZHX1-C8orf76Q96EF9 292 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 PBKQ96KB5 322 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 GPA33Q99795 319 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 RSPO3Q9BXY4 272 aaPredicted RBP11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 PARPBPQ9NWS1 579 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 ZNF69Q9UC07 566 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 FLVCR1Q9Y5Y0 555 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 A0A1B0GUS0 222 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 TCRBV9S1A1TA0A576 114 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 STX16-NPEPL1H3BU86 382 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 MANBAO00462 879 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 STX16O14662 325 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 PIP5K1BO14986 540 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 SYNGR3O43761 229 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 HSPA4LO95757 839 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 OTCP00480 354 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 C2P06681 752 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 ANXA4P09525 319 aaPredicted RBP11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 TCN1P20061 433 aaPredicted RBP11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 GATA3P23771 443 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 MAGEA8P43361 318 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 GSTM5P46439 218 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 ASMTP46597 345 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 SLC9A3R2Q15599 337 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 SPIN4Q56A73 249 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 TECRLQ5HYJ1 363 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 ASPHD2Q6ICH7 369 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 FAM71E1Q6IPT2 247 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 LRIG3Q6UXM1 1119 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 ZNF551Q7Z340 670 aaPredicted RBP11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 BCL6BQ8N143 479 aaPredicted RBP11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 KIR3DL3Q8N743 410 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 COX18Q8N8Q8 333 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 OR5W2Q8NH69 310 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 RFWD2Q8NHY2 731 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 CDC26Q8NHZ8 85 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 ACPTQ9BZG2 426 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 MIEF1Q9NQG6 463 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 REV1Q9UBZ9 1251 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 MID2Q9UJV3 735 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 SLC9A8Q9Y2E8 581 aa11.89□□□□□ -0.51
NKX3-1-202ENST00000523261 OR6C65A6NJZ3 312 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 H3BNH8 94 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 M0R233 179 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 GTPBP1O00178 669 aaKnown RBP11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 NR5A2O00482 541 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 DNPH1O43598 174 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 NCR1O76036 304 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 SEC31AO94979 1220 aaKnown RBP11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 KLHL2O95198 593 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 PMS2P2O95744 297 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 CELA3BP08861 270 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 TSPAN8P19075 237 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 PRKAG1P54619 331 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 TUBA1BP68363 451 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 TUBA4AP68366 448 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 MRPS11P82912 194 aaKnown RBP11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 HSPB3Q12988 150 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 MSMPQ1L6U9 139 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 BEAN1Q3B7T3 259 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 EXOSC6Q5RKV6 272 aaKnown RBP11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 CYS1Q717R9 158 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 TUBA1AQ71U36 451 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 CCDC91Q7Z6B0 441 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 CTAGE3PQ8IX95 158 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 FAM169BQ8N8A8 192 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 OR1K1Q8NGR3 316 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 SLC25A43Q8WUT9 341 aaPredicted RBP11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 RAB39BQ96DA2 213 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 DNAJA3Q96EY1 480 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 OTUB1Q96FW1 271 aaPredicted RBP11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 ZNF416Q9BWM5 594 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 MS4A5Q9H3V2 200 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 SERINC1Q9NRX5 453 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 OXSMQ9NWU1 459 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 GIN1Q9NXP7 522 aa11.88□□□□□ -0.51
NKX3-1-202ENST00000523261 ARPC4-TTLL3A0A0A6YYG9 625 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 IGHV2OR16-5A0A0B4J2B6 119 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 CCDC151A5D8V7 595 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 OR4F21O95013 312 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 TSPAN15O95858 294 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 IGKV3-15P01624 115 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 GSNP06396 782 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 RPS17P08708 135 aaKnown RBP11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 TFPIP10646 304 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 PCGF2P35227 344 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms