RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 CXCR4P61073 352 aa14.05□□□□□ -0.16
CTNNA1-236ENST00000522792 TUBA4AP68366 448 aa14.05□□□□□ -0.16
CTNNA1-236ENST00000522792 CHAF1BQ13112 559 aa14.05□□□□□ -0.16
CTNNA1-236ENST00000522792 SNAPC1Q16533 368 aa14.05□□□□□ -0.16
CTNNA1-236ENST00000522792 ZNF468Q5VIY5 522 aaPredicted RBP14.05□□□□□ -0.16
CTNNA1-236ENST00000522792 TMPRSS7Q7RTY8 843 aa14.05□□□□□ -0.16
CTNNA1-236ENST00000522792 DTX1Q86Y01 620 aa14.05□□□□□ -0.16
CTNNA1-236ENST00000522792 CLDN22Q8N7P3 220 aa14.05□□□□□ -0.16
CTNNA1-236ENST00000522792 THOC3Q96J01 351 aaKnown RBP14.05□□□□□ -0.16
CTNNA1-236ENST00000522792 TNFRSF13CQ96RJ3 184 aa14.05□□□□□ -0.16
CTNNA1-236ENST00000522792 NPAS1Q99742 590 aa14.05□□□□□ -0.16
CTNNA1-236ENST00000522792 TUBA8Q9NY65 449 aaPredicted RBP14.05□□□□□ -0.16
CTNNA1-236ENST00000522792 DNAJC27Q9NZQ0 273 aa14.05□□□□□ -0.16
CTNNA1-236ENST00000522792 SIGLEC7Q9Y286 467 aa14.05□□□□□ -0.16
CTNNA1-236ENST00000522792 FREM2Q5SZK8 3169 aa14.05□□□□□ -0.16
CTNNA1-236ENST00000522792 TLX2O43763 284 aaPredicted RBP14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 MPZL2O60487 215 aa14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 CCL3P10147 92 aa14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 CXCR1P25024 350 aa14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 EGR4Q05215 589 aa14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 PGGHGQ32M88 737 aa14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 NADK2Q4G0N4 442 aa14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 GXYLT1Q4G148 440 aa14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 ARSKQ6UWY0 536 aa14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 THSD4Q6ZMP0 1018 aa14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 KCTD8Q6ZWB6 473 aa14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 AHSA2Q719I0 299 aa14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 C10orf53Q8N6V4 93 aa14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 OR52L1Q8NGH7 329 aa14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 CCNL2Q96S94 520 aaPredicted RBP14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 TMEM43Q9BTV4 400 aa14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 SDHAF3Q9NRP4 125 aa14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 CLN6Q9NWW5 311 aa14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 HPF1Q9NWY4 346 aa14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 VDAC3Q9Y277 283 aa14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 GPR52Q9Y2T5 361 aa14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 RIF1Q5UIP0 2472 aaKnown RBP14.04□□□□□ -0.16
CTNNA1-236ENST00000522792 TRIM64CA6NLI5 447 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 G3V3Y1 287 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 SLC30A4O14863 429 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 HCN1O60741 890 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 ENTPD6O75354 484 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 LIFP15018 202 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 BMP7P18075 431 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 TCEA1P23193 301 aaKnown RBP14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 NR1H2P55055 460 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 SLC35A2P78381 396 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 ATP1A1-AS1Q5TC04 95 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 SMARCD3Q6STE5 483 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 SLC46A3Q7Z3Q1 461 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 VASH2Q86V25 355 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 ARMC10Q8N2F6 343 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 OR2T33Q8NG76 320 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 OR8J1Q8NGP2 316 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 KIAA1143Q96AT1 154 aaPredicted RBP14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 POLDIP3Q9BY77 421 aaKnown RBP14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 SLC19A3Q9BZV2 496 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 UBQLN3Q9H347 655 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 C12orf10Q9HB07 376 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 MCCC2Q9HCC0 563 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 HHATLQ9HCP6 504 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 PCNX3Q9H6A9 2034 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 AHCTF1Q8WYP5 2266 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 TMED7-TICAM2A0A0A6YYA0 188 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 PTP4A3O75365 173 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 OR7A10O76100 309 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 RCBTB2O95199 551 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 POLR2HP52434 150 aaKnown RBP14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 SNRPGP62308 76 aaKnown RBP14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 FHL1Q13642 323 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 NEDD8Q15843 81 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 ZBED5Q49AG3 693 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 GRINAQ7Z429 371 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 SPARTQ8N0X7 666 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 TMIGD2Q96BF3 282 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 KTI12Q96EK9 354 aaPredicted RBP14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 SLC38A2Q96QD8 506 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 IFT27Q9BW83 186 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 DUSP21Q9H596 190 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 GPR83Q9NYM4 423 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 CDV3Q9UKY7 258 aaKnown RBP14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 TMED7Q9Y3B3 224 aa14.03□□□□□ -0.16
CTNNA1-236ENST00000522792 TMEM72A0PK05 275 aa14.02□□□□□ -0.16
CTNNA1-236ENST00000522792 ZC3H12DA2A288 527 aaKnown RBP14.02□□□□□ -0.16
CTNNA1-236ENST00000522792 SHISA8B8ZZ34 492 aa14.02□□□□□ -0.16
CTNNA1-236ENST00000522792 SUSD5O60279 629 aa14.02□□□□□ -0.16
CTNNA1-236ENST00000522792 SLC2A10O95528 541 aa14.02□□□□□ -0.16
CTNNA1-236ENST00000522792 PRKCAP17252 672 aa14.02□□□□□ -0.16
CTNNA1-236ENST00000522792 RPS5P46782 204 aaKnown RBP14.02□□□□□ -0.16
CTNNA1-236ENST00000522792 SUMO3P55854 103 aaPredicted RBP14.02□□□□□ -0.16
CTNNA1-236ENST00000522792 TEKQ02763 1124 aa14.02□□□□□ -0.16
CTNNA1-236ENST00000522792 SRSF6Q13247 344 aaKnown RBP14.02□□□□□ -0.16
CTNNA1-236ENST00000522792 ACER2Q5QJU3 275 aa14.02□□□□□ -0.16
CTNNA1-236ENST00000522792 DCAF10Q5QP82 559 aa14.02□□□□□ -0.16
CTNNA1-236ENST00000522792 FOXB2Q5VYV0 432 aa14.02□□□□□ -0.16
CTNNA1-236ENST00000522792 H3F3CQ6NXT2 135 aa14.02□□□□□ -0.16
CTNNA1-236ENST00000522792 IGFN1Q86VF2 1251 aa14.02□□□□□ -0.16
CTNNA1-236ENST00000522792 BEST3Q8N1M1 668 aa14.02□□□□□ -0.16
CTNNA1-236ENST00000522792 TRUB1Q8WWH5 349 aaKnown RBP14.02□□□□□ -0.16
CTNNA1-236ENST00000522792 TMEM234Q8WY98 164 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms