RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 MST1P26927 711 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 NOS3P29474 1203 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 TRA2AQ13595 282 aaKnown RBP eCLIP16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 IL11RAQ14626 422 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 ZNF362Q5T0B9 420 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 FCRLBQ6BAA4 426 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 MARCH3Q86UD3 253 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 PHC2Q8IXK0 858 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 LRRC17Q8N6Y2 441 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 APCDD1LQ8NCL9 501 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 PSD4Q8NDX1 1056 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 DTNBP1Q96EV8 351 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 CTRCQ99895 268 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 TMEM43Q9BTV4 400 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 JAM3Q9BX67 310 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 HCAR1Q9BXC0 346 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 TBL1XR1Q9BZK7 514 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 ISYNA1Q9NPH2 558 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 A0A1B0GVG6 124 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 LRRN3E7EW58 273 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 NDUFB5O43674 189 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 OR7A10O76100 309 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 IGF2P01344 180 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 ZNF3P17036 446 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 PAICSP22234 425 aaKnown RBP16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 PSMA1P25786 263 aaKnown RBP16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 ITGADQ13349 1161 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 ARMC4Q5T2S8 1044 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 LIPKQ5VXJ0 399 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 TCEAL6Q6IPX3 200 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 GDPGP1Q6ZNW5 385 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 LHFPL3Q86UP9 236 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 AMER2Q8N7J2 671 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 SLC37A3Q8NCC5 494 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 ZNF563Q8TA94 476 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 GATAD2BQ8WXI9 593 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 PTP4A1Q93096 173 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 TCEAL3Q969E4 200 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 MESP1Q9BRJ9 268 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 OCEL1Q9H607 264 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 TNFRSF10DQ9UBN6 386 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 PPIEQ9UNP9 301 aaKnown RBP16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 ZNF337Q9Y3M9 751 aa16.88■□□□□ 0.29
TRAPPC9-210ENST00000521667 HCRTR2O43614 444 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 EIF4E2O60573 245 aaKnown RBP16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 IFNGP01579 166 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 CPEP16870 476 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 NRG3P56975 720 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 TMED1Q13445 227 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 SIRT6Q8N6T7 355 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 OR51G2Q8NGK0 314 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 OR6Q1Q8NGQ2 317 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 DACH2Q96NX9 599 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 ERMAPQ96PL5 475 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 SECISBP2Q96T21 854 aaKnown RBP16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 SPSB2Q99619 263 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 SLC26A1Q9H2B4 701 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 FBXO8Q9NRD0 319 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 CCDC59Q9P031 241 aaKnown RBP16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 STUB1Q9UNE7 303 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 SPIN1Q9Y657 262 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 SEC16AO15027 2179 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 KMT2EQ8IZD2 1858 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 SLC22A31A6NKX4 558 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 CLDN25C9JDP6 229 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 J3QRE1 110 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 MEN1O00255 615 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 WWP2O00308 870 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 CPNE3O75131 537 aaKnown RBP16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 TSPAN19P0C672 248 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 ZFP36L1Q07352 338 aaKnown RBP16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 CRMP1Q14194 572 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 ZNF404Q494X3 552 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 KLHL12Q53G59 568 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 LCN10Q6JVE6 187 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 PAPD4Q6PIY7 484 aaKnown RBP16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 ZNF485Q8NCK3 441 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 AGBL5Q8NDL9 886 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 OR5M3Q8NGP4 307 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 MCFD2Q8NI22 146 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 TM9SF4Q92544 642 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 KISS1RQ969F8 398 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 ZNF524Q96C55 264 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 KLHDC3Q9BQ90 382 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 ARHGAP9Q9BRR9 750 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 ARRDC1-AS1Q9H2J1 176 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 C12orf10Q9HB07 376 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 EXOSC4Q9NPD3 245 aaKnown RBP16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 ERVK13-1Q9NX77 482 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 CHRNA9Q9UGM1 479 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 R4GN57 208 aa16.87■□□□□ 0.29
TRAPPC9-210ENST00000521667 ZC3H12DA2A288 527 aaKnown RBP16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 OR6C70A6NIJ9 312 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 METTL15A6NJ78 407 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 CRYBB2P43320 205 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 ZNF846Q147U1 533 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 B3GLCTQ6Y288 498 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 KLHL36Q8N4N3 616 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 BMPERQ8N8U9 685 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 S100ZQ8WXG8 99 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms