RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 STX16-NPEPL1H3BU86 382 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 TRIM77I1YAP6 450 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 J3KR12 359 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 BTN3A3O00478 584 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 STX16O14662 325 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 TIMM23O14925 209 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 HDAC3O15379 428 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 EEF1E1O43324 174 aaKnown RBP4.73□□□□□ -1.65
GYPB-212ENST00000511198 ZBTB14O43829 449 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 SSX4O60224 188 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 PRPSAP2O60256 369 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 NOL3O60936 208 aaKnown RBP4.73□□□□□ -1.65
GYPB-212ENST00000511198 LYPLA1O75608 230 aaPredicted RBP4.73□□□□□ -1.65
GYPB-212ENST00000511198 PIAS1O75925 651 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 STAMBPO95630 424 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 APRTP07741 180 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 DAOP14920 347 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 NCF2P19878 526 aaPredicted RBP4.73□□□□□ -1.65
GYPB-212ENST00000511198 FMO4P31512 558 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 SERPINB5P36952 375 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 SRP14P37108 136 aaKnown RBP4.73□□□□□ -1.65
GYPB-212ENST00000511198 EMP2P54851 167 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 CDH6P55285 790 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 RPS4XP62701 263 aaKnown RBP4.73□□□□□ -1.65
GYPB-212ENST00000511198 MRPS22P82650 360 aaKnown RBP4.73□□□□□ -1.65
GYPB-212ENST00000511198 LGALS3BPQ08380 585 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 ZNF829Q3KNS6 432 aaPredicted RBP4.73□□□□□ -1.65
GYPB-212ENST00000511198 ZNF672Q499Z4 452 aaPredicted RBP4.73□□□□□ -1.65
GYPB-212ENST00000511198 CCDC14Q49A88 953 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 ZBED5Q49AG3 693 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 BOLA3Q53S33 107 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 SPANXN3Q5MJ09 141 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 GRTP1Q5TC63 336 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 WBP2NLQ6ICG8 309 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 KRT80Q6KB66 452 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 NIPAL1Q6NVV3 410 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 DENND1BQ6P3S1 775 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 ZNF534Q76KX8 674 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 GPR141Q7Z602 305 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 TMEM110Q86TL2 294 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 GPR180Q86V85 440 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 SNX32Q86XE0 403 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 C10orf107Q8IVU9 208 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 WDTC1Q8N5D0 677 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 MINDY2Q8NBR6 621 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 JOSD2Q8TAC2 188 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 MRAPQ8TCY5 172 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 HSPH1Q92598 858 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 SCRN2Q96FV2 425 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 DOK1Q99704 481 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 TUBA1CQ9BQE3 449 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 TIMM29Q9BSF4 260 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 RBM24Q9BX46 236 aaKnown RBP4.73□□□□□ -1.65
GYPB-212ENST00000511198 NPLQ9BXD5 320 aaPredicted RBP4.73□□□□□ -1.65
GYPB-212ENST00000511198 TRIM15Q9C019 465 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 DRC3Q9H069 523 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 MMP27Q9H306 513 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 ASB8Q9H765 288 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 COG4Q9H9E3 785 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 WDR41Q9HAD4 459 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 EFCAB1Q9HAE3 211 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.73□□□□□ -1.65
GYPB-212ENST00000511198 GIN1Q9NXP7 522 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 KLHL28Q9NXS3 571 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 KIF17Q9P2E2 1029 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 TXNDC16Q9P2K2 825 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 NDRG3Q9UGV2 375 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 MAU2Q9Y6X3 613 aa4.73□□□□□ -1.65
GYPB-212ENST00000511198 IGLV5-37A0A075B6J1 123 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 IGHV3-20A0A0C4DH32 117 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 A0A1B0GVC2 190 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 TCRBV3S1A0A5B6 114 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 PINLYPA6NC86 204 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 G3V4G9 280 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 FAM72CH0Y354 149 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 KLRC4-KLRK1H3BQV0 150 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 H3BSA7 217 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 CDC7O00311 574 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 AIM2O14862 343 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 UGT1A9O60656 530 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 SUPT3HO75486 399 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 SERPINB7O75635 380 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 VAPBO95292 243 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 ADAP00813 363 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 IGHG3P01860 377 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 SOD3P08294 240 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 ZNF26P17031 533 aaPredicted RBP4.72□□□□□ -1.65
GYPB-212ENST00000511198 CXCR2P25025 360 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 DPP4P27487 766 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 DCKP27707 260 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 SPRP35270 261 aaPredicted RBP4.72□□□□□ -1.65
GYPB-212ENST00000511198 ERFP50548 548 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 ARSFP54793 590 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 CSE1LP55060 971 aaKnown RBP4.72□□□□□ -1.65
GYPB-212ENST00000511198 SNX16P57768 344 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 HILS1P60008 231 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 PPIAP62937 165 aaKnown RBP4.72□□□□□ -1.65
GYPB-212ENST00000511198 CDKL1Q00532 357 aa4.72□□□□□ -1.65
GYPB-212ENST00000511198 PLOD1Q02809 727 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms