RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 C1orf54Q8WWF1 131 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 CIB1Q99828 191 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 FAM118BQ9BPY3 351 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 ING2Q9H160 280 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 EVA1AQ9H8M9 152 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 VIPAS39Q9H9C1 493 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 C12orf4Q9NQ89 552 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 DNAJC11Q9NVH1 559 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 GPR83Q9NYM4 423 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 KCNN3Q9UGI6 736 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 CRLS1Q9UJA2 301 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 RPH3AQ9Y2J0 694 aaPredicted RBP4.47□□□□□ -1.69
NEK1-204ENST00000509912 TESMINQ9Y4I5 508 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 TEX264Q9Y6I9 313 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 GOLGA8QA0A0J9YX86 632 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 GOLGA8OA6NCC3 632 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 GOLGA8NF8WBI6 632 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 GOLGA8RI6L899 631 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 FOXE1O00358 373 aaPredicted RBP4.47□□□□□ -1.69
NEK1-204ENST00000509912 SLC33A1O00400 549 aaPredicted RBP4.47□□□□□ -1.69
NEK1-204ENST00000509912 BCKDKO14874 412 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 SEMA3DO95025 777 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 BAG2O95816 211 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 S100A6P06703 90 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 SERPINA6P08185 405 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 ZCCHC18P0CG32 403 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 PGAM1P18669 254 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 AVPR1BP47901 424 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 POLR2GP62487 172 aaKnown RBP eCLIP4.47□□□□□ -1.69
NEK1-204ENST00000509912 TUBA4AP68366 448 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 SERTAD2Q14140 314 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 NDUFAF5Q5TEU4 345 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 AGAP7PQ5VUJ5 663 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 TRAPPC5Q8IUR0 188 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 SLC38A6Q8IZM9 456 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 GBGT1Q8N5D6 347 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 NFAM1Q8NET5 270 aaPredicted RBP4.47□□□□□ -1.69
NEK1-204ENST00000509912 OR2L3Q8NG85 312 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 OR4K2Q8NGD2 314 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 MCOLN3Q8TDD5 553 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 ART5Q96L15 291 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 AGAP4Q96P64 663 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 NTN4Q9HB63 628 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 ACKR4Q9NPB9 350 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 MS4A12Q9NXJ0 267 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 FBXL2Q9UKC9 423 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 ACOT9Q9Y305 439 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 SNX24Q9Y343 169 aa4.47□□□□□ -1.69
NEK1-204ENST00000509912 UTP11Q9Y3A2 253 aaKnown RBP4.47□□□□□ -1.69
NEK1-204ENST00000509912 A0A1W2PPK0 400 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 OR52A4PA6NMU1 304 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 ZBTB14O43829 449 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 MGRN1O60291 552 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 SMPD2O60906 423 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 GLSO94925 669 aaPredicted RBP4.46□□□□□ -1.7
NEK1-204ENST00000509912 OR5F1O95221 314 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 RNF224P0DH78 156 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 COX6A1P12074 109 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 POU2F1P14859 743 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 ZNF10P21506 573 aaPredicted RBP4.46□□□□□ -1.7
NEK1-204ENST00000509912 MAGEA12P43365 314 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 SLC6A12P48065 614 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 RPP38P78345 283 aaKnown RBP4.46□□□□□ -1.7
NEK1-204ENST00000509912 MAD2L1Q13257 205 aaPredicted RBP4.46□□□□□ -1.7
NEK1-204ENST00000509912 CEBPEQ15744 281 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 CTF1Q16619 201 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 ZXDCQ2QGD7 858 aaPredicted RBP4.46□□□□□ -1.7
NEK1-204ENST00000509912 CTU2Q2VPK5 515 aaKnown RBP4.46□□□□□ -1.7
NEK1-204ENST00000509912 SLC25A35Q3KQZ1 300 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 PRR30Q53SZ7 412 aaPredicted RBP4.46□□□□□ -1.7
NEK1-204ENST00000509912 TYW3Q6IPR3 259 aaKnown RBP4.46□□□□□ -1.7
NEK1-204ENST00000509912 CCDC137Q6PK04 289 aaKnown RBP4.46□□□□□ -1.7
NEK1-204ENST00000509912 NHLRC1Q6VVB1 395 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 KCNMB4Q86W47 210 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 TMEM156Q8N614 296 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 CCNYQ8ND76 341 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 C12orf66Q96MD2 445 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 MAP3K3Q99759 626 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 WDR83Q9BRX9 315 aaKnown RBP4.46□□□□□ -1.7
NEK1-204ENST00000509912 C8orf4Q9NR00 106 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 FARSBQ9NSD9 589 aaKnown RBP4.46□□□□□ -1.7
NEK1-204ENST00000509912 CUTCQ9NTM9 273 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 SOHLH2Q9NX45 425 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 KLHL9Q9P2J3 617 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 ZNF282Q9UDV7 671 aaPredicted RBP4.46□□□□□ -1.7
NEK1-204ENST00000509912 CHMP2BQ9UQN3 213 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 OARD1Q9Y530 152 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 MED13Q9UHV7 2174 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 TCP11X1B4DZS4 312 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 CLDN1O95832 211 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 ZNF3P17036 446 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 CYP2A7P20853 494 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 COILP38432 576 aaPredicted RBP4.46□□□□□ -1.7
NEK1-204ENST00000509912 ATP5OP48047 213 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 HNRNPFP52597 415 aaKnown RBP4.46□□□□□ -1.7
NEK1-204ENST00000509912 PPP1CAP62136 330 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 HSPB3Q12988 150 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 CUL1Q13616 776 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 PPP1R7Q15435 360 aa4.46□□□□□ -1.7
NEK1-204ENST00000509912 FAM199XQ6PEV8 388 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms