RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 SERPINE1P05121 402 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 FESP07332 822 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 FAM90A13PP0C7W8 464 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 FAM90A24PP0C7X0 464 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 MYZAPP0CAP1 466 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 DHRS4L1P0CG22 281 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 KITP10721 976 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 G6PDP11413 515 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 CYP4B1P13584 511 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 NAGAP17050 411 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 PRPH2P23942 346 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 ACVR2AP27037 513 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 PEX2P28328 305 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 IL12BP29460 328 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 NTSP30990 170 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 PTGDSP41222 190 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 STARP49675 285 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 RPL14P50914 215 aaKnown RBP4.1□□□□□ -1.75
NUP54-206ENST00000508465 AGFG1P52594 562 aaKnown RBP4.1□□□□□ -1.75
NUP54-206ENST00000508465 SMSP52788 366 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 DIO3P55073 304 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 CASP9P55211 416 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 NUP107P57740 925 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 SRYQ05066 204 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 BST1Q10588 318 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 STX5Q13190 355 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 ART3Q13508 389 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 SNTB1Q13884 538 aaKnown RBP4.1□□□□□ -1.75
NUP54-206ENST00000508465 PTGR1Q14914 329 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 KRT72Q14CN4 511 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 RPS6KA2Q15349 733 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 HYAL4Q2M3T9 481 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 TNFAIP8L3Q5GJ75 292 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 DCST1Q5T197 706 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 CCNJQ5T5M9 372 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 CPTPQ5TA50 214 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 TIGD3Q6B0B8 471 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 RTL6Q6ICC9 239 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 XKRXQ6PP77 449 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 LRIG3Q6UXM1 1119 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 APOOLQ6UXV4 268 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 ZNF813Q6ZN06 617 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 SZRD1Q7Z422 152 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 MARCH3Q86UD3 253 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 LIX1LQ8IVB5 337 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 CNPY4Q8N129 248 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 WDSUB1Q8N9V3 476 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 FNDC5Q8NAU1 212 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 FAM83FQ8NEG4 500 aaPredicted RBP4.1□□□□□ -1.75
NUP54-206ENST00000508465 OR5M1Q8NGP8 315 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 OR1J4Q8NGS1 313 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 OR4C3Q8NH37 302 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 NEIL3Q8TAT5 605 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 ZNF675Q8TD23 568 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 GPR151Q8TDV0 419 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 DUSP19Q8WTR2 217 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 SDCCAG3Q96C92 435 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 PGM2Q96G03 612 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 FCRL1Q96LA6 429 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 ZNF597Q96LX8 424 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 PPP3R2Q96LZ3 170 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 BTBD9Q96Q07 612 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 CCT7Q99832 543 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 NUF2Q9BZD4 464 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 TINAGL1Q9GZM7 467 aaPredicted RBP4.1□□□□□ -1.75
NUP54-206ENST00000508465 DSN1Q9H410 356 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 WDR55Q9H6Y2 383 aaPredicted RBP4.1□□□□□ -1.75
NUP54-206ENST00000508465 TMBIM4Q9HC24 238 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 DDX18Q9NVP1 670 aaKnown RBP4.1□□□□□ -1.75
NUP54-206ENST00000508465 TAS2R9Q9NYW1 312 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 KLRF1Q9NZS2 232 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 MED11Q9P086 117 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 FBXO9Q9UK97 447 aaPredicted RBP4.1□□□□□ -1.75
NUP54-206ENST00000508465 FBXL2Q9UKC9 423 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 CAMK2AQ9UQM7 478 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 RNF6Q9Y252 685 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 CFL2Q9Y281 166 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 RPH3AQ9Y2J0 694 aaPredicted RBP4.1□□□□□ -1.75
NUP54-206ENST00000508465 C15orf41Q9Y2V0 281 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 WBP11Q9Y2W2 641 aaKnown RBP4.1□□□□□ -1.75
NUP54-206ENST00000508465 SNX8Q9Y5X2 465 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 KCNE3Q9Y6H6 103 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 NCKAP5O14513 1909 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 APCP25054 2843 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 FREM3P0C091 2139 aa4.1□□□□□ -1.75
NUP54-206ENST00000508465 MED12Q93074 2177 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 DNAJC13O75165 2243 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 A0A087WV62 115 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 GOLGA8QA0A0J9YX86 632 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 A0A1W2PRB8 838 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 GOLGA8OA6NCC3 632 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 CCDC154A6NI56 674 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 OR6C70A6NIJ9 312 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 TMEM114B3SHH9 223 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 GOLGA8NF8WBI6 632 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 BCKDKO14874 412 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 ACOX3O15254 700 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 TM9SF1O15321 606 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 EMC8O43402 210 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 HCN1O60741 890 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms