RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 TMEFF2Q9UIK5 374 aaPredicted RBP5.04□□□□□ -1.6
GYPB-208ENST00000507009 ICAM5Q9UMF0 924 aa5.04□□□□□ -1.6
GYPB-208ENST00000507009 FAF1Q9UNN5 650 aaPredicted RBP5.04□□□□□ -1.6
GYPB-208ENST00000507009 KCNE3Q9Y6H6 103 aa5.04□□□□□ -1.6
GYPB-208ENST00000507009 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.04□□□□□ -1.66e-10■■■■■ 33.8
GYPB-208ENST00000507009 EXOC1LA0A1B0GW35 172 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 LOC390937A0A1W2PQ73 354 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 ZNF724A8MTY0 619 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 LYNX1G3V0Z9 82 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 NDUFS8O00217 210 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 CFLARO15519 480 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 ZNF264O43296 627 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 KRT33AO76009 404 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 ITGA5P08648 1049 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 SNRPAP09012 282 aaKnown RBP5.03□□□□□ -1.6
GYPB-208ENST00000507009 LINC00032P0C843 101 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 LYNX1P0DP58 116 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 MYL2P10916 166 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 EGR1P18146 543 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 SDC1P18827 310 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 CASQ1P31415 396 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 NTF4P34130 210 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 RYKP34925 604 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 MAP3K8P41279 467 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 CHN2P52757 468 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 PRKAA2P54646 552 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 ATP12AP54707 1039 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 SUMO3P55854 103 aaPredicted RBP5.03□□□□□ -1.6
GYPB-208ENST00000507009 SESN3P58005 492 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 RPL38P63173 70 aaKnown RBP5.03□□□□□ -1.6
GYPB-208ENST00000507009 TUBA1BP68363 451 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 TUBA4AP68366 448 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 CSNK2A1P68400 391 aaPredicted RBP5.03□□□□□ -1.6
GYPB-208ENST00000507009 MST1LQ2TV78 715 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 HIKESHIQ53FT3 197 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 KLHL26Q53HC5 615 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 SYT14P1Q58G82 188 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 CFAP157Q5JU67 520 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 PDZK1Q5T2W1 519 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 ABLIM2Q6H8Q1 611 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 OR7E24Q6IFN5 339 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 SHQ1Q6PI26 577 aaKnown RBP5.03□□□□□ -1.6
GYPB-208ENST00000507009 TUBA1AQ71U36 451 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 HMGN2P46Q86SG4 172 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 SLC22A9Q8IVM8 553 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 ZCCHC24Q8N2G6 241 aaKnown RBP5.03□□□□□ -1.6
GYPB-208ENST00000507009 WDR31Q8NA23 367 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 CCDC63Q8NA47 563 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 OR5D16Q8NGK9 328 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 ZNF563Q8TA94 476 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 GCDHQ92947 438 aaPredicted RBP5.03□□□□□ -1.6
GYPB-208ENST00000507009 FAM120BQ96EK7 910 aaKnown RBP5.03□□□□□ -1.6
GYPB-208ENST00000507009 L3HYPDHQ96EM0 354 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 OR11A1Q9GZK7 315 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 HOXD1Q9GZZ0 328 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 PIGUQ9H490 435 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 TNFRSF12AQ9NP84 129 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 SLC17A5Q9NRA2 495 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 CTPS2Q9NRF8 586 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 SLC7A10Q9NS82 523 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 ZDHHC18Q9NUE0 388 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 SIRT5Q9NXA8 310 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 GIMAP2Q9UG22 337 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 PYCARDQ9ULZ3 195 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 AMDHD2Q9Y303 409 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 DTNAQ9Y4J8 743 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 ACTL7BQ9Y614 415 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 TENM1Q9UKZ4 2725 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 MEGF8Q7Z7M0 2845 aa5.03□□□□□ -1.6
GYPB-208ENST00000507009 PLCE1Q9P212 2302 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 SVEP1Q4LDE5 3571 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 A0A087WUV0 522 aaPredicted RBP5.02□□□□□ -1.61
GYPB-208ENST00000507009 GOLGA8QA0A0J9YX86 632 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 CENPVL1A0A0U1RR11 272 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 GOLGA8OA6NCC3 632 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 SERINC4A6NH21 518 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 GOLGA8NF8WBI6 632 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 hCG_2039718K7EN88 272 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 SLC28A1O00337 649 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 GPR171O14626 319 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 EIF4E2O60573 245 aaKnown RBP5.02□□□□□ -1.61
GYPB-208ENST00000507009 RSL1D1O76021 490 aaKnown RBP5.02□□□□□ -1.61
GYPB-208ENST00000507009 SNUPNO95149 360 aaKnown RBP5.02□□□□□ -1.61
GYPB-208ENST00000507009 STAMBPO95630 424 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 HSPA4LO95757 839 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 WNT11O96014 354 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 CSTAP01040 98 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 ERCC1P07992 297 aaPredicted RBP5.02□□□□□ -1.61
GYPB-208ENST00000507009 OR4A8P0C604 315 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 DAOP14920 347 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 IFNGR1P15260 489 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 PGCP20142 388 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 LCN1P31025 176 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 SERPINF1P36955 418 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 HPCAL1P37235 193 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 SLC1A3P43003 542 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 MAGEA8P43361 318 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 CCT3P49368 545 aaKnown RBP5.02□□□□□ -1.61
GYPB-208ENST00000507009 PRPS1P60891 318 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 RPS26P62854 115 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms