RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 PARD6BQ9BYG5 372 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 NMUR2Q9GZQ4 415 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 PTGES2Q9H7Z7 377 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 POPDC2Q9HBU9 364 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 ONECUT1Q9UBC0 465 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 ERVW-1Q9UQF0 538 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 POLDIP2Q9Y2S7 368 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 TIMM10BQ9Y5J6 103 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 TNRQ92752 1358 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 EPOPA6NHQ4 379 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 PALMO75781 387 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 IL1BP01584 269 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 IGKV3-15P01624 115 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 OR8U8P0C7N1 319 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 POLR2EP19388 210 aaKnown RBP2.94□□□□□ -1.94
SMC4-225ENST00000497203 GCAP28676 217 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 RGRP47804 291 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 OR3A4PP47883 348 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 RIPPLY3P57055 190 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 ASPHQ12797 758 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 ZMYND11Q15326 602 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 OR4F3Q6IEY1 312 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 UTS2BQ765I0 119 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 FBXO16Q8IX29 292 aaPredicted RBP2.94□□□□□ -1.94
SMC4-225ENST00000497203 ZNF100Q8IYN0 542 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 OR5D13Q8NGL4 314 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 PAQR8Q8TEZ7 354 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 RAPGEF5Q92565 580 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 SEC22AQ96IW7 307 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 MAGEB18Q96M61 343 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 CCNL2Q96S94 520 aaPredicted RBP2.94□□□□□ -1.94
SMC4-225ENST00000497203 NHEJ1Q9H9Q4 299 aaPredicted RBP2.94□□□□□ -1.94
SMC4-225ENST00000497203 PRR34Q9NV39 138 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 TMEM9Q9P0T7 183 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 TP53TG3Q9ULZ0 132 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 UBQLN1Q9UMX0 589 aaKnown RBP2.94□□□□□ -1.94
SMC4-225ENST00000497203 MEMO1Q9Y316 297 aa2.94□□□□□ -1.94
SMC4-225ENST00000497203 RPAP1Q9BWH6 1393 aaPredicted RBP2.94□□□□□ -1.94
SMC4-225ENST00000497203 FAM240BA0A1B0GVZ2 78 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 HELTA6NFD8 242 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 IDSB3KWA1 339 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 GOLGA8SH3BPF8 625 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 HIP1O00291 1037 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 MED7O43513 233 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 PFKFB2O60825 505 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 B4GALT2O60909 372 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 IGHDP01880 384 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 HSPB1P04792 205 aaKnown RBP2.93□□□□□ -1.94
SMC4-225ENST00000497203 EPS15P42566 896 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 CRYBB1P53674 252 aaPredicted RBP2.93□□□□□ -1.94
SMC4-225ENST00000497203 DIO3P55073 304 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 RIPK4P57078 832 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 ZNF45Q02386 682 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 KYAT1Q16773 422 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 KLHL38Q2WGJ6 581 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 EOGTQ5NDL2 527 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 TMEM179BQ7Z7N9 219 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 ZNF589Q86UQ0 364 aaPredicted RBP2.93□□□□□ -1.94
SMC4-225ENST00000497203 CCDC65Q8IXS2 484 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 FBXL16Q8N461 479 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 C14orf178Q8N769 122 aaPredicted RBP2.93□□□□□ -1.94
SMC4-225ENST00000497203 MFSD9Q8NBP5 474 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 OR10H4Q8NGA5 316 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 OR13C2Q8NGS9 318 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 OR56B4Q8NH76 319 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 CLCC1Q96S66 551 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 COPS8Q99627 209 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 GAL3ST1Q99999 423 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 NICN1Q9BSH3 213 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 MAGT1Q9H0U3 335 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 FN3KRPQ9HA64 309 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 SGK2Q9HBY8 427 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 MCCC2Q9HCC0 563 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 PIGLQ9Y2B2 252 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 FRMPD3Q5JV73 1810 aa2.93□□□□□ -1.94
SMC4-225ENST00000497203 A0A1B0GUS0 222 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 TUBAL3A6NHL2 446 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 HAT1O14929 419 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 RGS16O15492 202 aaPredicted RBP2.92□□□□□ -1.94
SMC4-225ENST00000497203 PRKAB2O43741 272 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 DIRAS1O95057 198 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 LYPD3O95274 346 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 CLDN9O95484 217 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 KLK2P20151 261 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 GNA11P29992 359 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 CALCRP30988 508 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 RFC4P35249 363 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 BTDP43251 543 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 MAGEA8P43361 318 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 RPL23AP62750 156 aaKnown RBP2.92□□□□□ -1.94
SMC4-225ENST00000497203 TNFRSF17Q02223 184 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 KLRB1Q12918 225 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 MAJINQ3KP22 176 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 C1orf220Q5T0J3 134 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 FHL5Q5TD97 284 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 ACOT7LQ6ZUV0 252 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 RUFY3Q7L099 469 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 SH2D6Q7Z4S9 175 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 FAM83FQ8NEG4 500 aaPredicted RBP2.92□□□□□ -1.94
SMC4-225ENST00000497203 BBS1Q8NFJ9 593 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms