RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 CCDC106Q9BWC9 280 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 NMUR2Q9GZQ4 415 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 SERINC1Q9NRX5 453 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 ACER3Q9NUN7 267 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 MALT1Q9UDY8 824 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 KCNS2Q9ULS6 477 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 MRPL33O75394 65 aaKnown RBP11.98□□□□□ -0.49
SAMM50-204ENST00000493161 CSTAP01040 98 aa11.98□□□□□ -0.49
SAMM50-204ENST00000493161 CCNA2P20248 432 aa11.98□□□□□ -0.49
SAMM50-204ENST00000493161 APOBEC3AP31941 199 aaPredicted RBP11.98□□□□□ -0.49
SAMM50-204ENST00000493161 NR4A2P43354 598 aa11.98□□□□□ -0.49
SAMM50-204ENST00000493161 HBA1P69905 142 aa11.98□□□□□ -0.49
SAMM50-204ENST00000493161 PLAURQ03405 335 aa11.98□□□□□ -0.49
SAMM50-204ENST00000493161 ANKS4BQ8N8V4 417 aa11.98□□□□□ -0.49
SAMM50-204ENST00000493161 AGR3Q8TD06 166 aa11.98□□□□□ -0.49
SAMM50-204ENST00000493161 SFXN5Q8TD22 340 aa11.98□□□□□ -0.49
SAMM50-204ENST00000493161 COQ8BQ96D53 544 aa11.98□□□□□ -0.49
SAMM50-204ENST00000493161 FBXO17Q96EF6 278 aa11.98□□□□□ -0.49
SAMM50-204ENST00000493161 C1orf159Q96HA4 380 aa11.98□□□□□ -0.49
SAMM50-204ENST00000493161 FOXN4Q96NZ1 517 aa11.98□□□□□ -0.49
SAMM50-204ENST00000493161 SLC17A5Q9NRA2 495 aa11.98□□□□□ -0.49
SAMM50-204ENST00000493161 SLC7A10Q9NS82 523 aa11.98□□□□□ -0.49
SAMM50-204ENST00000493161 MOKQ9UQ07 419 aa11.98□□□□□ -0.49
SAMM50-204ENST00000493161 CFLARO15519 480 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 PMS2P2O95744 297 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 CHEK2O96017 543 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 FGF4P08620 206 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 KRT16P08779 473 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 CSF3P09919 207 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 APEHP13798 732 aaKnown RBP11.97□□□□□ -0.49
SAMM50-204ENST00000493161 PGCP20142 388 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 MATN1P21941 496 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 RYKP34925 604 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 SOAT1P35610 550 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 PGM1P36871 562 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 CCT5P48643 541 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 SLC16A1P53985 500 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 PHC1P78364 1004 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 CHRNB3Q05901 458 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 CARTPTQ16568 116 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 XKR7Q5GH72 579 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 TSPO2Q5TGU0 170 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 OR7E24Q6IFN5 339 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 C6orf120Q7Z4R8 191 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 ADGRG3Q86Y34 549 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 RIMKLAQ8IXN7 391 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 GSPT2Q8IYD1 628 aaKnown RBP11.97□□□□□ -0.49
SAMM50-204ENST00000493161 CLECL1Q8IZS7 167 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 C4orf33Q8N1A6 199 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 FAM71CQ8NEG0 241 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 PIGXQ8TBF5 258 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 SLC25A43Q8WUT9 341 aaPredicted RBP11.97□□□□□ -0.49
SAMM50-204ENST00000493161 TMEM234Q8WY98 164 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 ARL8AQ96BM9 186 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 ZG16BQ96DA0 208 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 FKRPQ9H9S5 495 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 CHRNA9Q9UGM1 479 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 PMF1-BGLAPU3KQ54 211 aa11.97□□□□□ -0.49
SAMM50-204ENST00000493161 NUP214P35658 2090 aaPredicted RBP11.96□□□□□ -0.49
SAMM50-204ENST00000493161 SMIM23A6NLE4 172 aa11.96□□□□□ -0.49
SAMM50-204ENST00000493161 CLDN24A6NM45 220 aa11.96□□□□□ -0.49
SAMM50-204ENST00000493161 TMEM114B3SHH9 223 aa11.96□□□□□ -0.49
SAMM50-204ENST00000493161 COPEO14579 308 aa11.96□□□□□ -0.49
SAMM50-204ENST00000493161 GPR171O14626 319 aa11.96□□□□□ -0.49
SAMM50-204ENST00000493161 STX11O75558 287 aa11.96□□□□□ -0.49
SAMM50-204ENST00000493161 SLU7O95391 586 aaKnown RBP11.96□□□□□ -0.49
SAMM50-204ENST00000493161 TGFAP01135 160 aa11.96□□□□□ -0.49
SAMM50-204ENST00000493161 KRT4P19013 534 aa11.96□□□□□ -0.49
SAMM50-204ENST00000493161 ARRB2P32121 409 aa11.96□□□□□ -0.49
SAMM50-204ENST00000493161 APOBEC1P41238 236 aaKnown RBP11.96□□□□□ -0.49
SAMM50-204ENST00000493161 PDLIM4P50479 330 aa11.96□□□□□ -0.49
SAMM50-204ENST00000493161 OR2B6P58173 313 aa11.96□□□□□ -0.49
SAMM50-204ENST00000493161 H3F3AP84243 136 aa11.96□□□□□ -0.49
SAMM50-204ENST00000493161 ARHGAP11BQ3KRB8 267 aa11.96□□□□□ -0.49
SAMM50-204ENST00000493161 LSM12Q3MHD2 195 aaKnown RBP11.96□□□□□ -0.49
SAMM50-204ENST00000493161 C6orf136Q5SQH8 315 aa11.96□□□□□ -0.49
SAMM50-204ENST00000493161 IL23RQ5VWK5 629 aa11.96□□□□□ -0.49
SAMM50-204ENST00000493161 CASP12Q6UXS9 341 aa11.96□□□□□ -0.49
SAMM50-204ENST00000493161 EIF3MQ7L2H7 374 aaKnown RBP11.96□□□□□ -0.49
SAMM50-204ENST00000493161 ANP32BQ92688 251 aaKnown RBP11.96□□□□□ -0.49
SAMM50-204ENST00000493161 PIMREGQ9BSJ6 248 aa11.96□□□□□ -0.49
SAMM50-204ENST00000493161 ZNF350Q9GZX5 532 aa11.96□□□□□ -0.49
SAMM50-204ENST00000493161 FLVCR1Q9Y5Y0 555 aa11.96□□□□□ -0.49
SAMM50-204ENST00000493161 ARFGEF3Q5TH69 2177 aa11.95□□□□□ -0.5
SAMM50-204ENST00000493161 KLF11O14901 512 aa11.95□□□□□ -0.5
SAMM50-204ENST00000493161 TRIM13O60858 407 aa11.95□□□□□ -0.5
SAMM50-204ENST00000493161 IMPDH2P12268 514 aa11.95□□□□□ -0.5
SAMM50-204ENST00000493161 BMP4P12644 408 aa11.95□□□□□ -0.5
SAMM50-204ENST00000493161 DDX5P17844 614 aaKnown RBP11.95□□□□□ -0.5
SAMM50-204ENST00000493161 CDH2P19022 906 aaPredicted RBP11.95□□□□□ -0.5
SAMM50-204ENST00000493161 MAPK1P28482 360 aa11.95□□□□□ -0.5
SAMM50-204ENST00000493161 ALDH3A1P30838 453 aa11.95□□□□□ -0.5
SAMM50-204ENST00000493161 RPL3P39023 403 aaKnown RBP11.95□□□□□ -0.5
SAMM50-204ENST00000493161 FUT5Q11128 374 aa11.95□□□□□ -0.5
SAMM50-204ENST00000493161 HIKESHIQ53FT3 197 aa11.95□□□□□ -0.5
SAMM50-204ENST00000493161 TYW3Q6IPR3 259 aaKnown RBP11.95□□□□□ -0.5
SAMM50-204ENST00000493161 EMBQ6PCB8 327 aa11.95□□□□□ -0.5
SAMM50-204ENST00000493161 ZNF563Q8TA94 476 aa11.95□□□□□ -0.5
SAMM50-204ENST00000493161 RAB8BQ92930 207 aa11.95□□□□□ -0.5
SAMM50-204ENST00000493161 MOAP1Q96BY2 351 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms