RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 OIT3Q8WWZ8 545 aa15.28■□□□□ 0.04
SGMS1-204ENST00000492601 CNOT9Q92600 299 aaKnown RBP15.28■□□□□ 0.04
SGMS1-204ENST00000492601 ARL5BQ96KC2 179 aa15.28■□□□□ 0.04
SGMS1-204ENST00000492601 POTEKPQ9BYX7 375 aa15.28■□□□□ 0.04
SGMS1-204ENST00000492601 OR11A1Q9GZK7 315 aa15.28■□□□□ 0.04
SGMS1-204ENST00000492601 CXorf56Q9H5V9 222 aa15.28■□□□□ 0.04
SGMS1-204ENST00000492601 ESRP2Q9H6T0 727 aaKnown RBP15.28■□□□□ 0.04
SGMS1-204ENST00000492601 NGBQ9NPG2 151 aa15.28■□□□□ 0.04
SGMS1-204ENST00000492601 CHRNA9Q9UGM1 479 aa15.28■□□□□ 0.04
SGMS1-204ENST00000492601 GPR45Q9Y5Y3 372 aa15.28■□□□□ 0.04
SGMS1-204ENST00000492601 SPIN1Q9Y657 262 aaPredicted RBP15.28■□□□□ 0.04
SGMS1-204ENST00000492601 CR1P17927 2039 aa15.27■□□□□ 0.04
SGMS1-204ENST00000492601 SONP18583 2426 aaKnown RBP15.27■□□□□ 0.04
SGMS1-204ENST00000492601 ZNF724A8MTY0 619 aa15.27■□□□□ 0.04
SGMS1-204ENST00000492601 FAM171A2A8MVW0 826 aa15.27■□□□□ 0.04
SGMS1-204ENST00000492601 AP3D1O14617 1153 aa15.27■□□□□ 0.04
SGMS1-204ENST00000492601 CNOT4O95628 575 aaKnown RBP15.27■□□□□ 0.04
SGMS1-204ENST00000492601 IGHV3-9P01782 118 aa15.27■□□□□ 0.04
SGMS1-204ENST00000492601 CHRM4P08173 479 aa15.27■□□□□ 0.04
SGMS1-204ENST00000492601 IDH2P48735 452 aaKnown RBP15.27■□□□□ 0.04
SGMS1-204ENST00000492601 ATP5J2P56134 94 aa15.27■□□□□ 0.04
SGMS1-204ENST00000492601 BSPH1Q075Z2 132 aa15.27■□□□□ 0.04
SGMS1-204ENST00000492601 COX20Q5RI15 118 aa15.27■□□□□ 0.04
SGMS1-204ENST00000492601 AP1ARQ63HQ0 302 aa15.27■□□□□ 0.04
SGMS1-204ENST00000492601 NXNQ6DKJ4 435 aa15.27■□□□□ 0.04
SGMS1-204ENST00000492601 GRINAQ7Z429 371 aa15.27■□□□□ 0.04
SGMS1-204ENST00000492601 MTDHQ86UE4 582 aaKnown RBP15.27■□□□□ 0.04
SGMS1-204ENST00000492601 ADGRG3Q86Y34 549 aa15.27■□□□□ 0.04
SGMS1-204ENST00000492601 TRIML2Q8N7C3 387 aa15.27■□□□□ 0.04
SGMS1-204ENST00000492601 ZBTB18Q99592 522 aa15.27■□□□□ 0.04
SGMS1-204ENST00000492601 ABCA1O95477 2261 aa15.26■□□□□ 0.03
SGMS1-204ENST00000492601 TRPC5OSA6NMA1 111 aa15.26■□□□□ 0.03
SGMS1-204ENST00000492601 HDAC3O15379 428 aa15.26■□□□□ 0.03
SGMS1-204ENST00000492601 SNNO75324 88 aaPredicted RBP15.26■□□□□ 0.03
SGMS1-204ENST00000492601 PAX1P15863 534 aa15.26■□□□□ 0.03
SGMS1-204ENST00000492601 IGHV1-2P23083 117 aa15.26■□□□□ 0.03
SGMS1-204ENST00000492601 ABLIM2Q6H8Q1 611 aa15.26■□□□□ 0.03
SGMS1-204ENST00000492601 SEZ6L2Q6UXD5 910 aa15.26■□□□□ 0.03
SGMS1-204ENST00000492601 KBTBD8Q8NFY9 601 aa15.26■□□□□ 0.03
SGMS1-204ENST00000492601 PIWIL2Q8TC59 973 aaKnown RBP15.26■□□□□ 0.03
SGMS1-204ENST00000492601 FBXW5Q969U6 566 aa15.26■□□□□ 0.03
SGMS1-204ENST00000492601 ZHX1-C8orf76Q96EF9 292 aa15.26■□□□□ 0.03
SGMS1-204ENST00000492601 TRNT1Q96Q11 434 aaKnown RBP15.26■□□□□ 0.03
SGMS1-204ENST00000492601 SLC38A1Q9H2H9 487 aa15.26■□□□□ 0.03
SGMS1-204ENST00000492601 EXOSC3Q9NQT5 275 aaKnown RBP15.26■□□□□ 0.03
SGMS1-204ENST00000492601 ZNF701Q9NV72 531 aaPredicted RBP15.26■□□□□ 0.03
SGMS1-204ENST00000492601 THAP1Q9NVV9 213 aa15.26■□□□□ 0.03
SGMS1-204ENST00000492601 EMC3Q9P0I2 261 aa15.26■□□□□ 0.03
SGMS1-204ENST00000492601 LIPT1Q9Y234 373 aa15.26■□□□□ 0.03
SGMS1-204ENST00000492601 DPRXA6NFQ7 191 aa15.25■□□□□ 0.03
SGMS1-204ENST00000492601 AGAP5A6NIR3 686 aa15.25■□□□□ 0.03
SGMS1-204ENST00000492601 PMS2P2O95744 297 aa15.25■□□□□ 0.03
SGMS1-204ENST00000492601 SOD3P08294 240 aa15.25■□□□□ 0.03
SGMS1-204ENST00000492601 NR2F1P10589 423 aa15.25■□□□□ 0.03
SGMS1-204ENST00000492601 ANXA11P50995 505 aaKnown RBP15.25■□□□□ 0.03
SGMS1-204ENST00000492601 OR2B6P58173 313 aa15.25■□□□□ 0.03
SGMS1-204ENST00000492601 RPS4XP62701 263 aaKnown RBP15.25■□□□□ 0.03
SGMS1-204ENST00000492601 PPA1Q15181 289 aa15.25■□□□□ 0.03
SGMS1-204ENST00000492601 ADAM5Q6NVV9 412 aa15.25■□□□□ 0.03
SGMS1-204ENST00000492601 DNAJC14Q6Y2X3 702 aaPredicted RBP15.25■□□□□ 0.03
SGMS1-204ENST00000492601 LRRC74BQ6ZQY2 392 aa15.25■□□□□ 0.03
SGMS1-204ENST00000492601 CCDC103Q8IW40 242 aa15.25■□□□□ 0.03
SGMS1-204ENST00000492601 UBE2J2Q8N2K1 259 aa15.25■□□□□ 0.03
SGMS1-204ENST00000492601 WDR60Q8WVS4 1066 aa15.25■□□□□ 0.03
SGMS1-204ENST00000492601 USB1Q9BQ65 265 aaKnown RBP15.25■□□□□ 0.03
SGMS1-204ENST00000492601 SLC6A13Q9NSD5 602 aa15.25■□□□□ 0.03
SGMS1-204ENST00000492601 NOSIPQ9Y314 301 aaKnown RBP15.25■□□□□ 0.03
SGMS1-204ENST00000492601 HDGFL3Q9Y3E1 203 aa15.25■□□□□ 0.03
SGMS1-204ENST00000492601 IGKV3D-15A0A087WSY6 115 aa15.24■□□□□ 0.03
SGMS1-204ENST00000492601 TMED7-TICAM2A0A0A6YYA0 188 aa15.24■□□□□ 0.03
SGMS1-204ENST00000492601 TMEM72A0PK05 275 aa15.24■□□□□ 0.03
SGMS1-204ENST00000492601 ZNF716A6NP11 495 aa15.24■□□□□ 0.03
SGMS1-204ENST00000492601 RAMP1O60894 148 aa15.24■□□□□ 0.03
SGMS1-204ENST00000492601 IL7RP16871 459 aa15.24■□□□□ 0.03
SGMS1-204ENST00000492601 GGT1P19440 569 aa15.24■□□□□ 0.03
SGMS1-204ENST00000492601 COX5AP20674 150 aa15.24■□□□□ 0.03
SGMS1-204ENST00000492601 PDK3Q15120 406 aa15.24■□□□□ 0.03
SGMS1-204ENST00000492601 ZNF672Q499Z4 452 aaPredicted RBP15.24■□□□□ 0.03
SGMS1-204ENST00000492601 MRPL2Q5T653 305 aaKnown RBP15.24■□□□□ 0.03
SGMS1-204ENST00000492601 ATG16L1Q676U5 607 aa15.24■□□□□ 0.03
SGMS1-204ENST00000492601 ZNF433Q8N7K0 673 aaPredicted RBP15.24■□□□□ 0.03
SGMS1-204ENST00000492601 SMAP2Q8WU79 429 aaPredicted RBP15.24■□□□□ 0.03
SGMS1-204ENST00000492601 MUCL1Q96DR8 90 aa15.24■□□□□ 0.03
SGMS1-204ENST00000492601 MTHFD2LQ9H903 347 aaPredicted RBP15.24■□□□□ 0.03
SGMS1-204ENST00000492601 OSGIN1Q9UJX0 560 aa15.24■□□□□ 0.03
SGMS1-204ENST00000492601 TMED7Q9Y3B3 224 aa15.24■□□□□ 0.03
SGMS1-204ENST00000492601 RFXANKO14593 260 aa15.23■□□□□ 0.03
SGMS1-204ENST00000492601 TMCC2O75069 709 aa15.23■□□□□ 0.03
SGMS1-204ENST00000492601 SLC22A3O75751 556 aa15.23■□□□□ 0.03
SGMS1-204ENST00000492601 RAD51DO75771 328 aa15.23■□□□□ 0.03
SGMS1-204ENST00000492601 DANCRP0C864 163 aa15.23■□□□□ 0.03
SGMS1-204ENST00000492601 TACR3P29371 465 aa15.23■□□□□ 0.03
SGMS1-204ENST00000492601 NTF4P34130 210 aa15.23■□□□□ 0.03
SGMS1-204ENST00000492601 CDKN1AP38936 164 aa15.23■□□□□ 0.03
SGMS1-204ENST00000492601 HTR3AP46098 478 aa15.23■□□□□ 0.03
SGMS1-204ENST00000492601 CLK1P49759 484 aaKnown RBP15.23■□□□□ 0.03
SGMS1-204ENST00000492601 POLR2HP52434 150 aaKnown RBP15.23■□□□□ 0.03
SGMS1-204ENST00000492601 MAGOHP61326 146 aaKnown RBP15.23■□□□□ 0.03
SGMS1-204ENST00000492601 LRRC74AQ0VAA2 488 aa15.23■□□□□ 0.03
SGMS1-204ENST00000492601 FAPQ12884 760 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms