RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	P2RY8	Q86VZ1	359 aa		13.56	□□□□□ -0.24
MRPL55-231	ENST00000492170	VPS37A	Q8NEZ2	397 aa		13.56	□□□□□ -0.24
MRPL55-231	ENST00000492170	XAGE5	Q8WWM1	108 aa		13.56	□□□□□ -0.24
MRPL55-231	ENST00000492170	MAEL	Q96JY0	434 aa	Known RBP	13.56	□□□□□ -0.24
MRPL55-231	ENST00000492170	HS6ST2	Q96MM7	605 aa		13.56	□□□□□ -0.24
MRPL55-231	ENST00000492170	C7orf26	Q96N11	449 aa		13.56	□□□□□ -0.24
MRPL55-231	ENST00000492170	REG4	Q9BYZ8	158 aa		13.56	□□□□□ -0.24
MRPL55-231	ENST00000492170	CHRNA9	Q9UGM1	479 aa		13.56	□□□□□ -0.24
MRPL55-231	ENST00000492170	ANK3	Q12955	4377 aa	Known RBP	13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	CAD	P27708	2225 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	IGKV3D-15	A0A087WSY6	115 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	TP53	P04637	393 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	GUSB	P08236	651 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	OR12D1	P0DN82	309 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	UQCRC2	P22695	453 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	EDNRA	P25101	427 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	PGM1	P36871	562 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	ACVR1B	P36896	505 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	APOBEC1	P41238	236 aa	Known RBP	13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	KHK	P50053	298 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	CASP9	P55211	416 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	HPCA	P84074	193 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	KRTAP1-1	Q07627	177 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	PDK3	Q15120	406 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	MAPK14	Q16539	360 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	TYW3	Q6IPR3	259 aa	Known RBP	13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	MTDH	Q86UE4	582 aa	Known RBP	13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	ANKRD46	Q86W74	232 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	UBE2J2	Q8N2K1	259 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	MAPK1IP1L	Q8NDC0	245 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	FAM71C	Q8NEG0	241 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	PIGX	Q8TBF5	258 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	APH1A	Q96BI3	265 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	ROPN1L	Q96C74	230 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	CCDC106	Q9BWC9	280 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	SLCO5A1	Q9H2Y9	848 aa		13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	BARX1	Q9HBU1	254 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	INTS9	Q9NV88	658 aa	Known RBP	13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	CISD1	Q9NZ45	108 aa	Known RBP	13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	MARCO	Q9UEW3	520 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	NOSIP	Q9Y314	301 aa	Known RBP	13.55	□□□□□ -0.24
MRPL55-231	ENST00000492170	PRSS51	A0A1B0GVH4	220 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	OR5H1	A6NKK0	313 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	TRPC5OS	A6NMA1	111 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	SHISA9	B4DS77	424 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	ABCD4	O14678	606 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	DNPH1	O43598	174 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	CRLF1	O75462	422 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	PGM3	O95394	542 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	CPSF4	O95639	269 aa	Known RBP	13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	PMS2P2	O95744	297 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	IGHV4-39	P01824	125 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	LBP	P18428	481 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	FKBP2	P26885	142 aa	Known RBP	13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	RYK	P34925	604 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	CHI3L1	P36222	383 aa	Predicted RBP	13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	CLNS1A	P54105	237 aa	Known RBP	13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	DPY19L1	Q2PZI1	675 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	FBXW9	Q5XUX1	488 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	SAXO2	Q658L1	398 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	GRINA	Q7Z429	371 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	MAVS	Q7Z434	540 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	DTX2	Q86UW9	622 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	ZNF433	Q8N7K0	673 aa	Predicted RBP	13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	LRRC8C	Q8TDW0	803 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	RAB8B	Q92930	207 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	TESC	Q96BS2	214 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	RADIL	Q96JH8	1075 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	MDFI	Q99750	246 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	GRIP2	Q9C0E4	1043 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	CTPS2	Q9NRF8	586 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	NPAP1	Q9NZP6	1156 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	HDGFL3	Q9Y3E1	203 aa		13.54	□□□□□ -0.24
MRPL55-231	ENST00000492170	CIB4	A0PJX0	185 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	GPR171	O14626	319 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	RAMP1	O60894	148 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	SCN2B	O60939	215 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	RAD51D	O75771	328 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	THBS1	P07996	1170 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	KIT	P10721	976 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	CLK1	P49759	484 aa	Known RBP	13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	FUT5	Q11128	374 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	NRF1	Q16656	503 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	GPAT3	Q53EU6	434 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	AGAP6	Q5VW22	663 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	TMEM108	Q6UXF1	575 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	FRRS1	Q6ZNA5	592 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	ARFGAP2	Q8N6H7	521 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	CKAP2	Q8WWK9	683 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	NEURL3	Q96EH8	262 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	SAP130	Q9H0E3	1048 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	SLCO1B3	Q9NPD5	702 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	EXOSC3	Q9NQT5	275 aa	Known RBP	13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	POU2F3	Q9UKI9	436 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	ADAM21	Q9UKJ8	722 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	MGAT4B	Q9UQ53	548 aa		13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	SON	P18583	2426 aa	Known RBP	13.53	□□□□□ -0.24
MRPL55-231	ENST00000492170	GOLGA8Q	A0A0J9YX86	632 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms