RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 FLNAP21333 2647 aaKnown RBP12.44□□□□□ -0.42
VTI1A-206ENST00000489142 ROS1P08922 2347 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 ZC3H12DA2A288 527 aaKnown RBP12.43□□□□□ -0.42
VTI1A-206ENST00000489142 NR5A2O00482 541 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 LYZL6O75951 148 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 IGHV3-9P01782 118 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 DBIP07108 87 aaKnown RBP12.43□□□□□ -0.42
VTI1A-206ENST00000489142 PPP3CBP16298 524 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 PSMB1P20618 241 aaKnown RBP12.43□□□□□ -0.42
VTI1A-206ENST00000489142 IL32P24001 234 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 TACR3P29371 465 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 AQP5P55064 265 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 OR2B6P58173 313 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 STX1BP61266 288 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 CSNK2A1P68400 391 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-206ENST00000489142 EPS8Q12929 822 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 ABLIM2Q6H8Q1 611 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 KRTAP1-3Q8IUG1 177 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 CCDC103Q8IW40 242 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 CMIPQ8IY22 773 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 OR52P1PQ8NH57 321 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 SLC25A43Q8WUT9 341 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-206ENST00000489142 GTF2H4Q92759 462 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 KISS1RQ969F8 398 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-206ENST00000489142 MAL2Q969L2 176 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 TMEM19Q96HH6 336 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 CCL19Q99731 98 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 PAIP1Q9H074 479 aaKnown RBP12.43□□□□□ -0.42
VTI1A-206ENST00000489142 FANCFQ9NPI8 374 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 OSGIN1Q9UJX0 560 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 GPR52Q9Y2T5 361 aa12.43□□□□□ -0.42
VTI1A-206ENST00000489142 SPIN1Q9Y657 262 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-206ENST00000489142 DSPPQ9NZW4 1301 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 MTORP42345 2549 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 CFAP73A6NFT4 308 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 TFPTP0C1Z6 253 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 ZCCHC18P0CG32 403 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 OR3A2P47893 321 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 POLR2HP52434 150 aaKnown RBP12.42□□□□□ -0.42
VTI1A-206ENST00000489142 TXNL4AP83876 142 aaKnown RBP12.42□□□□□ -0.42
VTI1A-206ENST00000489142 GNA13Q14344 377 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 CAPRIN1Q14444 709 aaKnown RBP12.42□□□□□ -0.42
VTI1A-206ENST00000489142 STK11Q15831 433 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 ACKR1Q16570 336 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 BEX5Q5H9J7 111 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 SFRP5Q5T4F7 317 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 ZNF704Q6ZNC4 412 aaPredicted RBP12.42□□□□□ -0.42
VTI1A-206ENST00000489142 MSANTD1Q6ZTZ1 278 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 MTDHQ86UE4 582 aaKnown RBP12.42□□□□□ -0.42
VTI1A-206ENST00000489142 FUNDC1Q8IVP5 155 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 CLIP4Q8N3C7 705 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 CADM2Q8N3J6 435 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 STEAP2Q8NFT2 490 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 GP6Q9HCN6 339 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 BEX4Q9NWD9 120 aaPredicted RBP12.42□□□□□ -0.42
VTI1A-206ENST00000489142 SLC25A37Q9NYZ2 338 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 CCDC167Q9P0B6 97 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 SLAMF8Q9P0V8 285 aa12.42□□□□□ -0.42
VTI1A-206ENST00000489142 ZNF443Q9Y2A4 671 aaPredicted RBP12.42□□□□□ -0.42
VTI1A-206ENST00000489142 SETD2Q9BYW2 2564 aaPredicted RBP12.41□□□□□ -0.42
VTI1A-206ENST00000489142 C2CD3Q4AC94 2353 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 CDHR4A6H8M9 788 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 ZNF716A6NP11 495 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 CLIC1O00299 241 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 FRS3O43559 492 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 SMPD2O60906 423 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 PMS2P2O95744 297 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 IMPDH2P12268 514 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 PRG2P13727 222 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 HOXB9P17482 250 aaPredicted RBP12.41□□□□□ -0.42
VTI1A-206ENST00000489142 NTF4P34130 210 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 CRISP3P54108 245 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 NKX6-1P78426 367 aaPredicted RBP12.41□□□□□ -0.42
VTI1A-206ENST00000489142 HOXC5Q00444 222 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 BNIP2Q12982 314 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 RGNQ15493 299 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 TAB1Q15750 504 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 LIN52Q52LA3 116 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 BHLHA15Q7RTS1 189 aaPredicted RBP12.41□□□□□ -0.42
VTI1A-206ENST00000489142 HDXQ7Z353 690 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 GALNT5Q7Z7M9 940 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 MSRB3Q8IXL7 192 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 ZNF100Q8IYN0 542 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 C10orf111Q8N326 155 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 GOLGA6L1Q8N7Z2 621 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 PERPQ96FX8 193 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 TACO1Q9BSH4 297 aaKnown RBP12.41□□□□□ -0.42
VTI1A-206ENST00000489142 GSX1Q9H4S2 264 aaPredicted RBP12.41□□□□□ -0.42
VTI1A-206ENST00000489142 INTS9Q9NV88 658 aaKnown RBP12.41□□□□□ -0.42
VTI1A-206ENST00000489142 CALML5Q9NZT1 146 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 HDGFL3Q9Y3E1 203 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 CHST2Q9Y4C5 530 aa12.41□□□□□ -0.42
VTI1A-206ENST00000489142 ARID1AO14497 2285 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 A0A096LPI6 279 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 ZNF724A8MTY0 619 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 TGDSO95455 350 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 IGHV1-2P23083 117 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 ADSLP30566 484 aaPredicted RBP12.4□□□□□ -0.42
VTI1A-206ENST00000489142 HOXC12P31275 282 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 ACAA2P42765 397 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms