RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 H3BNH8 94 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 KLF11O14901 512 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 MRPL33O75394 65 aaKnown RBP11.22□□□□□ -0.61
UBR4-213ENST00000483922 STAMBPO95630 424 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 PMS2P2O95744 297 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 C6orf47O95873 294 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 TGP01266 2768 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 C1QCP02747 245 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 MYL2P10916 166 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 IMPDH2P12268 514 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 PGM1P36871 562 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 ETF1P62495 437 aaKnown RBP11.22□□□□□ -0.61
UBR4-213ENST00000483922 TP53BP2Q13625 1128 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 HIKESHIQ53FT3 197 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 AP1ARQ63HQ0 302 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 OR7E24Q6IFN5 339 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 RNF165Q6ZSG1 346 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 ZCCHC24Q8N2G6 241 aaKnown RBP11.22□□□□□ -0.61
UBR4-213ENST00000483922 OR5AK3PQ8NH89 298 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 ACMSDQ8TDX5 336 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 OR5P2Q8WZ92 322 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 PIMREGQ9BSJ6 248 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 DCDC2Q9UHG0 476 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 MKLN1Q9UL63 735 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 FIS1Q9Y3D6 152 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 FLVCR1Q9Y5Y0 555 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 DYSFO75923 2080 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 NUP214P35658 2090 aaPredicted RBP11.21□□□□□ -0.61
UBR4-213ENST00000483922 AZIN1O14977 448 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 SCAMP2O15127 329 aaKnown RBP11.21□□□□□ -0.61
UBR4-213ENST00000483922 PLIN3O60664 434 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 CRCPO75575 148 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 CYP7B1O75881 506 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 ABHD2P08910 425 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 TACSTD2P09758 323 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 UBTFL6P0CB48 400 aaPredicted RBP11.21□□□□□ -0.61
UBR4-213ENST00000483922 SERPINF1P36955 418 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 CSNK2A1P68400 391 aaPredicted RBP11.21□□□□□ -0.61
UBR4-213ENST00000483922 PTGR1Q14914 329 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 GPR68Q15743 365 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 ADIPOQQ15848 244 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 CARTPTQ16568 116 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 GALNTL6Q49A17 601 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 IQCCQ4KMZ1 466 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 KANK2Q63ZY3 851 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 HMGN2P46Q86SG4 172 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 KRTCAP2Q8N6L1 136 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 FAM71CQ8NEG0 241 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 COQ8BQ96D53 544 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 VRK1Q99986 396 aaPredicted RBP11.21□□□□□ -0.61
UBR4-213ENST00000483922 NMUR2Q9GZQ4 415 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 IQCGQ9H095 443 aaKnown RBP11.21□□□□□ -0.61
UBR4-213ENST00000483922 SEC61A2Q9H9S3 476 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 FKRPQ9H9S5 495 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 SERINC1Q9NRX5 453 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 EMC3Q9P0I2 261 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 TBK1Q9UHD2 729 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 TMEFF2Q9UIK5 374 aaPredicted RBP11.21□□□□□ -0.61
UBR4-213ENST00000483922 DCTN4Q9UJW0 460 aa11.21□□□□□ -0.61
UBR4-213ENST00000483922 TMEM129A0AVI4 362 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 PRAMEF27A3QJZ7 478 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 CLDN24A6NM45 220 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 H3BQF6 201 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 RIPK2O43353 540 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 CSTAP01040 98 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 TFPIP10646 304 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 BMP4P12644 408 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 HNF1AP20823 631 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 GIFP27352 417 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 APOBEC1P41238 236 aaKnown RBP11.2□□□□□ -0.62
UBR4-213ENST00000483922 HBA1P69905 142 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 LGALS3BPQ08380 585 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 SLC17A1Q14916 467 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 TRIP10Q15642 601 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 RIMKLAQ8IXN7 391 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 C17orf78Q8N4C9 275 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 SEMA6DQ8NFY4 1073 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 OR56A1Q8NGH5 318 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 CCDC126Q96EE4 140 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 BOD1Q96IK1 185 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 C3orf30Q96M34 536 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 TRMOQ9BU70 441 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 GATA5Q9BWX5 397 aaPredicted RBP11.2□□□□□ -0.62
UBR4-213ENST00000483922 PLK3Q9H4B4 646 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 CHRNA9Q9UGM1 479 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 FAF1Q9UNN5 650 aaPredicted RBP11.2□□□□□ -0.62
UBR4-213ENST00000483922 AMDHD2Q9Y303 409 aa11.2□□□□□ -0.62
UBR4-213ENST00000483922 ZC3H12DA2A288 527 aaKnown RBP11.19□□□□□ -0.62
UBR4-213ENST00000483922 LYNX1G3V0Z9 82 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 NR5A2O00482 541 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 GPR171O14626 319 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 CHRNGP07510 517 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 FGF4P08620 206 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 OR4A8P0C604 315 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 FAM153BP0C7A2 387 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 LYNX1P0DP58 116 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 CPA3P15088 417 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 DDX5P17844 614 aaKnown RBP11.19□□□□□ -0.62
UBR4-213ENST00000483922 PGCP20142 388 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 CCNA2P20248 432 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms