RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 ZNF17P17021 662 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 SFTPDP35247 375 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 HTR3AP46098 478 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 CLDN20P56880 219 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 SPIBQ01892 262 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 EGR4Q05215 589 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 C19orf57Q0VDD7 668 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 C3AR1Q16581 482 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 ELOA3BQ3SY89 546 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 C1QL3Q5VWW1 255 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 VASNQ6EMK4 673 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 TBPL2Q6SJ96 375 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 LINC00114Q6XXX2 140 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 FGD2Q7Z6J4 655 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 UBQLNLQ8IYU4 475 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 OFCC1Q8IZS5 231 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 PIK3C3Q8NEB9 887 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 ELOA3Q8NG57 546 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 CPT1CQ8TCG5 803 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 TMEM255BQ8WV15 326 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 LRTOMTQ8WZ04 291 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 ABTB1Q969K4 478 aaPredicted RBP12.73□□□□□ -0.37
SRSF6-202ENST00000483871 DTNBP1Q96EV8 351 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 ARL5BQ96KC2 179 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 ZNF347Q96SE7 839 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 TIMP4Q99727 224 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 AGPAT4Q9NRZ5 378 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 SELENONQ9NZV5 590 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 U3KQV3 271 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 RELNP78509 3460 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 ZGRF1Q86YA3 2104 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 IGKV1D-42A0A075B6H8 117 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 TRBV4-1A0A0J9YWV2 114 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 A0A1B0GVC2 190 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 NPIPA2E9PIF3 369 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 NPIPA3F8WFD2 350 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 HCN1O60741 890 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 GADD45GO95257 159 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 H1F0P07305 194 aaKnown RBP12.73□□□□□ -0.37
SRSF6-202ENST00000483871 CHMP24386 653 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 IFNA8P32881 189 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 LHX2P50458 406 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 SUCLG1P53597 346 aaKnown RBP12.73□□□□□ -0.37
SRSF6-202ENST00000483871 IST1P53990 364 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 CLDN15P56746 228 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 RAC1P63000 192 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 SRYQ05066 204 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 LAPTM4AQ15012 233 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 TMEM176BQ3YBM2 270 aaPredicted RBP12.73□□□□□ -0.37
SRSF6-202ENST00000483871 OR2T5Q6IEZ7 315 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 AAGABQ6PD74 315 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 AMIGO2Q86SJ2 522 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 CHERPQ8IWX8 916 aaKnown RBP12.73□□□□□ -0.37
SRSF6-202ENST00000483871 OR2T29Q8NH02 315 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 SLC7A13Q8TCU3 470 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 SLX1AQ9BQ83 275 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 POLR2J2Q9GZM3 115 aaKnown RBP12.73□□□□□ -0.37
SRSF6-202ENST00000483871 POLR2J3Q9H1A7 115 aaKnown RBP12.73□□□□□ -0.37
SRSF6-202ENST00000483871 S100A14Q9HCY8 104 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 PRDM4Q9UKN5 801 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 A0A087WUU8 490 aa12.72□□□□□ -0.37
SRSF6-202ENST00000483871 A0A1W2PNR3 127 aa12.72□□□□□ -0.37
SRSF6-202ENST00000483871 KPNA4O00629 521 aaPredicted RBP12.72□□□□□ -0.37
SRSF6-202ENST00000483871 SEC14L5O43304 696 aa12.72□□□□□ -0.37
SRSF6-202ENST00000483871 PNMTP11086 282 aa12.72□□□□□ -0.37
SRSF6-202ENST00000483871 POU3F2P20265 443 aaPredicted RBP12.72□□□□□ -0.37
SRSF6-202ENST00000483871 CRYZQ08257 329 aaKnown RBP12.72□□□□□ -0.37
SRSF6-202ENST00000483871 SELENBP1Q13228 472 aa12.72□□□□□ -0.37
SRSF6-202ENST00000483871 TRAM2Q15035 370 aa12.72□□□□□ -0.37
SRSF6-202ENST00000483871 KRTCAP3Q53RY4 240 aa12.72□□□□□ -0.37
SRSF6-202ENST00000483871 FGD3Q5JSP0 725 aa12.72□□□□□ -0.37
SRSF6-202ENST00000483871 HMBOX1Q6NT76 420 aa12.72□□□□□ -0.37
SRSF6-202ENST00000483871 C3orf33Q6P1S2 294 aa12.72□□□□□ -0.37
SRSF6-202ENST00000483871 GHDCQ8N2G8 530 aa12.72□□□□□ -0.37
SRSF6-202ENST00000483871 KTI12Q96EK9 354 aaPredicted RBP12.72□□□□□ -0.37
SRSF6-202ENST00000483871 DHRS1Q96LJ7 313 aa12.72□□□□□ -0.37
SRSF6-202ENST00000483871 C12orf10Q9HB07 376 aa12.72□□□□□ -0.37
SRSF6-202ENST00000483871 SERINC1Q9NRX5 453 aa12.72□□□□□ -0.37
SRSF6-202ENST00000483871 LYVE1Q9Y5Y7 322 aa12.72□□□□□ -0.37
SRSF6-202ENST00000483871 SHANK1Q9Y566 2161 aa12.71□□□□□ -0.37
SRSF6-202ENST00000483871 A0A0J9YW62 118 aa12.71□□□□□ -0.37
SRSF6-202ENST00000483871 A0A1W2PRQ8 180 aa12.71□□□□□ -0.37
SRSF6-202ENST00000483871 LRRN3E7EW58 273 aa12.71□□□□□ -0.37
SRSF6-202ENST00000483871 H0Y3Z8 333 aa12.71□□□□□ -0.37
SRSF6-202ENST00000483871 TNFRSF11BO00300 401 aa12.71□□□□□ -0.37
SRSF6-202ENST00000483871 AQP7O14520 342 aa12.71□□□□□ -0.37
SRSF6-202ENST00000483871 GNGT2O14610 69 aa12.71□□□□□ -0.37
SRSF6-202ENST00000483871 CLOCKO15516 846 aa12.71□□□□□ -0.37
SRSF6-202ENST00000483871 HNRNPRO43390 633 aaKnown RBP12.71□□□□□ -0.37
SRSF6-202ENST00000483871 TFPIP10646 304 aa12.71□□□□□ -0.37
SRSF6-202ENST00000483871 THRBP10828 461 aa12.71□□□□□ -0.37
SRSF6-202ENST00000483871 ELK4P28324 431 aa12.71□□□□□ -0.37
SRSF6-202ENST00000483871 UGT2B15P54855 530 aa12.71□□□□□ -0.37
SRSF6-202ENST00000483871 CLDN18P56856 261 aa12.71□□□□□ -0.37
SRSF6-202ENST00000483871 DGCR6Q14129 220 aa12.71□□□□□ -0.37
SRSF6-202ENST00000483871 SEC23BQ15437 767 aa12.71□□□□□ -0.37
SRSF6-202ENST00000483871 SOWAHCQ53LP3 525 aaPredicted RBP12.71□□□□□ -0.37
SRSF6-202ENST00000483871 SYT14P1Q58G82 188 aa12.71□□□□□ -0.37
SRSF6-202ENST00000483871 NHSL2Q5HYW2 709 aa12.71□□□□□ -0.37
SRSF6-202ENST00000483871 SWT1Q5T5J6 900 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms