RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 CLDN24A6NM45 220 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 SSX4O60224 188 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 GPRIN2O60269 458 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 RAD51DO75771 328 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 PMS2P2O95744 297 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 UQCRC2P22695 453 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 TTKP33981 857 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 SLC16A1P53985 500 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 IRX1P78414 480 aaPredicted RBP14.7□□□□□ -0.06
TRIM13-208ENST00000478111 H3F3AP84243 136 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 SPOCK1Q08629 439 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 AGAP6Q5VW22 663 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 SAXO2Q658L1 398 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 EMBQ6PCB8 327 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 B3GLCTQ6Y288 498 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 HMGN2P46Q86SG4 172 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 ANKRD46Q86W74 232 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 NUDCD3Q8IVD9 361 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 CCDC103Q8IW40 242 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 ZNF781Q8N8C0 355 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 OR10H5Q8NGA6 315 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 OR52N5Q8NH56 324 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 ROPN1LQ96C74 230 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 RADILQ96JH8 1075 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 PKNOX2Q96KN3 472 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 PPP1R36Q96LQ0 422 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 MUS81Q96NY9 551 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 OR11A1Q9GZK7 315 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 BARX1Q9HBU1 254 aaPredicted RBP14.7□□□□□ -0.06
TRIM13-208ENST00000478111 POLE3Q9NRF9 147 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 FAIMQ9NVQ4 179 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 EMC3Q9P0I2 261 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 CHRNA9Q9UGM1 479 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 SLC35A3Q9Y2D2 325 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 NOSIPQ9Y314 301 aaKnown RBP14.7□□□□□ -0.06
TRIM13-208ENST00000478111 WDR45Q9Y484 360 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 MALRD1Q5VYJ5 2156 aa14.7□□□□□ -0.06
TRIM13-208ENST00000478111 A0A1W2PR80 420 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 PDLIM1O00151 329 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 DNPH1O43598 174 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 CPSF4O95639 269 aaKnown RBP14.69□□□□□ -0.06
TRIM13-208ENST00000478111 AGR2O95994 175 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 TP53P04637 393 aaPredicted RBP14.69□□□□□ -0.06
TRIM13-208ENST00000478111 TFPIP10646 304 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 RYKP34925 604 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 VSNL1P62760 191 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 KCNJ10P78508 379 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 CHRNEQ04844 493 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 CASP8Q14790 479 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 PDCD2Q16342 344 aaPredicted RBP14.69□□□□□ -0.06
TRIM13-208ENST00000478111 GABRA6Q16445 453 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 HMBOX1Q6NT76 420 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 TNFAIP8L2Q6P589 184 aaPredicted RBP14.69□□□□□ -0.06
TRIM13-208ENST00000478111 GRINAQ7Z429 371 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 PIAS4Q8N2W9 510 aaPredicted RBP14.69□□□□□ -0.06
TRIM13-208ENST00000478111 ZNF563Q8TA94 476 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 APH1AQ96BI3 265 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 NEURL3Q96EH8 262 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 DHRS9Q9BPW9 319 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 DPY30Q9C005 99 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 EXOSC3Q9NQT5 275 aaKnown RBP14.69□□□□□ -0.06
TRIM13-208ENST00000478111 YAE1D1Q9NRH1 226 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 MALT1Q9UDY8 824 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 PCDHGB4Q9UN71 923 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 MGAT4BQ9UQ53 548 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 HDGFL3Q9Y3E1 203 aa14.69□□□□□ -0.06
TRIM13-208ENST00000478111 SPIN1Q9Y657 262 aaPredicted RBP14.69□□□□□ -0.06
TRIM13-208ENST00000478111 ITGA5P08648 1049 aa14.68□□□□□ -0.06
TRIM13-208ENST00000478111 PTAFRP25105 342 aa14.68□□□□□ -0.06
TRIM13-208ENST00000478111 CD40P25942 277 aa14.68□□□□□ -0.06
TRIM13-208ENST00000478111 CLK1P49759 484 aaKnown RBP14.68□□□□□ -0.06
TRIM13-208ENST00000478111 ZNF83P51522 516 aa14.68□□□□□ -0.06
TRIM13-208ENST00000478111 IFFO1Q0D2I5 559 aa14.68□□□□□ -0.06
TRIM13-208ENST00000478111 NRF1Q16656 503 aa14.68□□□□□ -0.06
TRIM13-208ENST00000478111 ATAD3BQ5T9A4 648 aa14.68□□□□□ -0.06
TRIM13-208ENST00000478111 TMEM108Q6UXF1 575 aa14.68□□□□□ -0.06
TRIM13-208ENST00000478111 UBE2J2Q8N2K1 259 aa14.68□□□□□ -0.06
TRIM13-208ENST00000478111 WDR31Q8NA23 367 aa14.68□□□□□ -0.06
TRIM13-208ENST00000478111 CNOT9Q92600 299 aaKnown RBP14.68□□□□□ -0.06
TRIM13-208ENST00000478111 TESCQ96BS2 214 aa14.68□□□□□ -0.06
TRIM13-208ENST00000478111 CACNG6Q9BXT2 260 aa14.68□□□□□ -0.06
TRIM13-208ENST00000478111 CBLN4Q9NTU7 201 aa14.68□□□□□ -0.06
TRIM13-208ENST00000478111 ASB6Q9NWX5 421 aa14.68□□□□□ -0.06
TRIM13-208ENST00000478111 TRAPPC4Q9Y296 219 aa14.68□□□□□ -0.06
TRIM13-208ENST00000478111 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.67□□□□□ -0.065e-9■■■■□ 20.9
TRIM13-208ENST00000478111 CIB4A0PJX0 185 aa14.67□□□□□ -0.06
TRIM13-208ENST00000478111 WDR91A4D1P6 747 aa14.67□□□□□ -0.06
TRIM13-208ENST00000478111 CCT8L1PA6NM43 557 aa14.67□□□□□ -0.06
TRIM13-208ENST00000478111 HMGN4O00479 90 aa14.67□□□□□ -0.06
TRIM13-208ENST00000478111 AP3D1O14617 1153 aa14.67□□□□□ -0.06
TRIM13-208ENST00000478111 GPR171O14626 319 aa14.67□□□□□ -0.06
TRIM13-208ENST00000478111 MRPL33O75394 65 aaKnown RBP14.67□□□□□ -0.06
TRIM13-208ENST00000478111 IMPDH2P12268 514 aa14.67□□□□□ -0.06
TRIM13-208ENST00000478111 FKBP2P26885 142 aaKnown RBP14.67□□□□□ -0.06
TRIM13-208ENST00000478111 IDH2P48735 452 aaKnown RBP14.67□□□□□ -0.06
TRIM13-208ENST00000478111 SPANXN4Q5MJ08 99 aa14.67□□□□□ -0.06
TRIM13-208ENST00000478111 ANXA8L1Q5VT79 327 aa14.67□□□□□ -0.06
TRIM13-208ENST00000478111 SLC22A25Q6T423 547 aa14.67□□□□□ -0.06
TRIM13-208ENST00000478111 OR52E4Q8NGH9 312 aa14.67□□□□□ -0.06
TRIM13-208ENST00000478111 PIGXQ8TBF5 258 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms