RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 CNIH4Q9P003 139 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 MED31Q9Y3C7 131 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 CFAP47Q6ZTR5 3102 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 ACACBO00763 2458 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 CDC42EP2O14613 210 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 TP53I11O14683 189 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 HCRTR2O43614 444 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 MPZL2O60487 215 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 MRPS14O60783 128 aaKnown RBP6.01□□□□□ -1.45
ATG4A-207ENST00000474825 WBP4O75554 376 aaKnown RBP6.01□□□□□ -1.45
ATG4A-207ENST00000474825 SNX4O95219 450 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 SMIM18P0DKX4 95 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 POU2F1P14859 743 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 LIFP15018 202 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 PRKCAP17252 672 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 MAKP20794 623 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 CRHBPP24387 322 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 ADH6P28332 368 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 HTR3AP46098 478 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 SLC9A3P48764 834 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 HLCSP50747 726 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 RNF144AP50876 292 aaPredicted RBP6.01□□□□□ -1.45
ATG4A-207ENST00000474825 FXYD6P3P58550 94 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 RPS4XP62701 263 aaKnown RBP6.01□□□□□ -1.45
ATG4A-207ENST00000474825 CSNK2BP67870 215 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 TUBA4AP68366 448 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 AIMP2Q13155 320 aaKnown RBP6.01□□□□□ -1.45
ATG4A-207ENST00000474825 TOP3AQ13472 1001 aaPredicted RBP6.01□□□□□ -1.45
ATG4A-207ENST00000474825 ATP1A4Q13733 1029 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 TOMM34Q15785 309 aaPredicted RBP6.01□□□□□ -1.45
ATG4A-207ENST00000474825 MEP1AQ16819 746 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 TMEM44Q2T9K0 475 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 CTU2Q2VPK5 515 aaKnown RBP6.01□□□□□ -1.45
ATG4A-207ENST00000474825 TBC1D25Q3MII6 688 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 ANKDD1AQ495B1 522 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 ACER2Q5QJU3 275 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 BROXQ5VW32 411 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 KRT80Q6KB66 452 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 RPL13AP3Q6NVV1 102 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 TTC33Q6PID6 262 aaPredicted RBP6.01□□□□□ -1.45
ATG4A-207ENST00000474825 C5orf46Q6UWT4 87 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 ZNF620Q6ZNG0 422 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 RRM2BQ7LG56 351 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 SLC46A3Q7Z3Q1 461 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 GRINAQ7Z429 371 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 ADGRG3Q86Y34 549 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 ENTHD1Q8IYW4 607 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 DEPDC4Q8N2C3 294 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 IL22RA1Q8N6P7 574 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 WDSUB1Q8N9V3 476 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 GATSQ8NAP1 163 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 OR2M3Q8NG83 312 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 OR8D4Q8NGM9 314 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 RNF217Q8TC41 542 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 STK35Q8TDR2 534 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 APH1BQ8WW43 257 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 KIAA1143Q96AT1 154 aaPredicted RBP6.01□□□□□ -1.45
ATG4A-207ENST00000474825 BPIFA2Q96DR5 249 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 TMEM41AQ96HV5 264 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 FAM46AQ96IP4 442 aaKnown RBP6.01□□□□□ -1.45
ATG4A-207ENST00000474825 SIGLEC11Q96RL6 698 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 POLDIP3Q9BY77 421 aaKnown RBP6.01□□□□□ -1.45
ATG4A-207ENST00000474825 LHPPQ9H008 270 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 RIBC2Q9H4K1 309 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 DUSP21Q9H596 190 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 GPN2Q9H9Y4 310 aaPredicted RBP6.01□□□□□ -1.45
ATG4A-207ENST00000474825 BATF3Q9NR55 127 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 C20orf141Q9NUB4 165 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 TUBA8Q9NY65 449 aaPredicted RBP6.01□□□□□ -1.45
ATG4A-207ENST00000474825 RPS6KB2Q9UBS0 482 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 OSGIN1Q9UJX0 560 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 ZMIZ1Q9ULJ6 1067 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 SIGLEC7Q9Y286 467 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 MYRFQ9Y2G1 1151 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 HRH3Q9Y5N1 445 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 GMPPBQ9Y5P6 360 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 WIF1Q9Y5W5 379 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 MRPS18BQ9Y676 258 aaKnown RBP6.01□□□□□ -1.45
ATG4A-207ENST00000474825 CDH10Q9Y6N8 788 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 ASPMQ8IZT6 3477 aa6.01□□□□□ -1.45
ATG4A-207ENST00000474825 PTPRBP23467 1997 aa6□□□□□ -1.45
ATG4A-207ENST00000474825 NINQ8N4C6 2090 aa6□□□□□ -1.45
ATG4A-207ENST00000474825 A0A087WZY1 265 aa6□□□□□ -1.45
ATG4A-207ENST00000474825 SH3D21A4FU49 640 aa6□□□□□ -1.45
ATG4A-207ENST00000474825 TRABD2BA6NFA1 517 aa6□□□□□ -1.45
ATG4A-207ENST00000474825 UNC119BA6NIH7 251 aa6□□□□□ -1.45
ATG4A-207ENST00000474825 C17orf51A8MQB3 221 aa6□□□□□ -1.45
ATG4A-207ENST00000474825 BHLHE40O14503 412 aa6□□□□□ -1.45
ATG4A-207ENST00000474825 ZNF208O43345 1280 aa6□□□□□ -1.45
ATG4A-207ENST00000474825 PIP5K1CO60331 668 aa6□□□□□ -1.45
ATG4A-207ENST00000474825 TRIM3O75382 744 aaPredicted RBP6□□□□□ -1.45
ATG4A-207ENST00000474825 OR7A10O76100 309 aa6□□□□□ -1.45
ATG4A-207ENST00000474825 RCBTB2O95199 551 aa6□□□□□ -1.45
ATG4A-207ENST00000474825 TFAP2AP05549 437 aa6□□□□□ -1.45
ATG4A-207ENST00000474825 IGFBP1P08833 259 aaPredicted RBP6□□□□□ -1.45
ATG4A-207ENST00000474825 ASAH2BP0C7U1 165 aa6□□□□□ -1.45
ATG4A-207ENST00000474825 IFI30P13284 250 aa6□□□□□ -1.45
ATG4A-207ENST00000474825 WT1P19544 449 aaPredicted RBP6□□□□□ -1.45
ATG4A-207ENST00000474825 FKBP2P26885 142 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms