RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ATP6V1G3Q96LB4 118 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 C1orf50Q9BV19 199 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 ATAD3AQ9NVI7 634 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 ASB6Q9NWX5 421 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 DNAJC15Q9Y5T4 150 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 SLC25A15Q9Y619 301 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 ATP23Q9Y6H3 246 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 CENPVL1A0A0U1RR11 272 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 SERINC4A6NH21 518 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 H7C417 338 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 TYROBPO43914 113 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 LMX1BO60663 402 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 PEX11AO75192 247 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 CSTAP01040 98 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 CSF3P09919 207 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 CREB1P16220 341 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 USF1P22415 310 aaPredicted RBP12.3□□□□□ -0.44
CCDC78-209ENST00000474647 IGFBP5P24593 272 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 CRHR1P34998 444 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 SESN3P58005 492 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 GGTLC2Q14390 218 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 PCLAFQ15004 111 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 LSM12Q3MHD2 195 aaKnown RBP12.3□□□□□ -0.44
CCDC78-209ENST00000474647 C9orf135Q5VTT2 229 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 RNF165Q6ZSG1 346 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 TMPPEQ6ZT21 453 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 OLIG3Q7RTU3 272 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 SLC25A43Q8WUT9 341 aaPredicted RBP12.3□□□□□ -0.44
CCDC78-209ENST00000474647 TMEM234Q8WY98 164 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 ST8SIA1Q92185 356 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 C3orf49Q96BT1 292 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 MOAP1Q96BY2 351 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 SDF2Q99470 211 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 INPP5KQ9BT40 448 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 GATA5Q9BWX5 397 aaPredicted RBP12.3□□□□□ -0.44
CCDC78-209ENST00000474647 LAT2Q9GZY6 243 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 TAS2R16Q9NYV7 291 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 KCNS2Q9ULS6 477 aa12.3□□□□□ -0.44
CCDC78-209ENST00000474647 ZNF716A6NP11 495 aa12.29□□□□□ -0.44
CCDC78-209ENST00000474647 HMGB1P1B2RPK0 211 aaPredicted RBP12.29□□□□□ -0.44
CCDC78-209ENST00000474647 ETV2O00321 342 aaPredicted RBP12.29□□□□□ -0.44
CCDC78-209ENST00000474647 MRPL33O75394 65 aaKnown RBP12.29□□□□□ -0.44
CCDC78-209ENST00000474647 CHRNGP07510 517 aa12.29□□□□□ -0.44
CCDC78-209ENST00000474647 BMP4P12644 408 aa12.29□□□□□ -0.44
CCDC78-209ENST00000474647 PGCP20142 388 aa12.29□□□□□ -0.44
CCDC78-209ENST00000474647 FOXG1P55316 489 aaPredicted RBP12.29□□□□□ -0.44
CCDC78-209ENST00000474647 MAGOHP61326 146 aaKnown RBP12.29□□□□□ -0.44
CCDC78-209ENST00000474647 LSM11P83369 360 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCDC78-209ENST00000474647 CHRNB3Q05901 458 aa12.29□□□□□ -0.44
CCDC78-209ENST00000474647 CARTPTQ16568 116 aa12.29□□□□□ -0.44
CCDC78-209ENST00000474647 FAM166AQ6J272 317 aa12.29□□□□□ -0.44
CCDC78-209ENST00000474647 ZNF544Q6NX49 715 aa12.29□□□□□ -0.44
CCDC78-209ENST00000474647 CASP12Q6UXS9 341 aa12.29□□□□□ -0.44
CCDC78-209ENST00000474647 MTDHQ86UE4 582 aaKnown RBP12.29□□□□□ -0.44
CCDC78-209ENST00000474647 KRTCAP2Q8N6L1 136 aa12.29□□□□□ -0.44
CCDC78-209ENST00000474647 ZNF563Q8TA94 476 aa12.29□□□□□ -0.44
CCDC78-209ENST00000474647 PIGXQ8TBF5 258 aa12.29□□□□□ -0.44
CCDC78-209ENST00000474647 PROX1Q92786 737 aa12.29□□□□□ -0.44
CCDC78-209ENST00000474647 MID2Q9UJV3 735 aa12.29□□□□□ -0.44
CCDC78-209ENST00000474647 MKLN1Q9UL63 735 aa12.29□□□□□ -0.44
CCDC78-209ENST00000474647 SPIN1Q9Y657 262 aaPredicted RBP12.29□□□□□ -0.44
CCDC78-209ENST00000474647 PMF1-BGLAPU3KQ54 211 aa12.29□□□□□ -0.44
CCDC78-209ENST00000474647 IGKV3D-15A0A087WSY6 115 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 TRIM13O60858 407 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 SPAG7O75391 227 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 STX11O75558 287 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 ITGA5P08648 1049 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 MATN1P21941 496 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 RYKP34925 604 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 GZMKP49863 264 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 EFNA4P52798 201 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 GABRA6Q16445 453 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 ATP6AP1LQ52LC2 224 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 OR7E24Q6IFN5 339 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 BHLHB9Q6PI77 547 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 C16orf62Q7Z3J2 963 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 LSRQ86X29 649 aaPredicted RBP12.28□□□□□ -0.44
CCDC78-209ENST00000474647 CLEC4FQ8N1N0 589 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 FNDC5Q8NAU1 212 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 OR52E4Q8NGH9 312 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 PSMA8Q8TAA3 256 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 FBXO17Q96EF6 278 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 ARL5BQ96KC2 179 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 SLC35G5Q96KT7 338 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 PPP3R2Q96LZ3 170 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 PRPF18Q99633 342 aaKnown RBP12.28□□□□□ -0.44
CCDC78-209ENST00000474647 TRMOQ9BU70 441 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 NMUR2Q9GZQ4 415 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 FKRPQ9H9S5 495 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 MED4Q9NPJ6 270 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 CTPS2Q9NRF8 586 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 UPB1Q9UBR1 384 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 MALT1Q9UDY8 824 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 CHRNA9Q9UGM1 479 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 KCNE5Q9UJ90 142 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 FKBP7Q9Y680 259 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 DYSFO75923 2080 aa12.28□□□□□ -0.44
CCDC78-209ENST00000474647 LOC100289279A0A1B0GTE1 492 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 ATP6V1G2-DDX39BF2Z307 99 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 GPR171O14626 319 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms