RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 SLC7A10Q9NS82 523 aa16.51■□□□□ 0.23
NCKIPSD-209ENST00000470006 BAIAP2L1Q9UHR4 511 aa16.51■□□□□ 0.23
NCKIPSD-209ENST00000470006 PCDHB10Q9UN67 800 aa16.51■□□□□ 0.23
NCKIPSD-209ENST00000470006 KCNE3Q9Y6H6 103 aa16.51■□□□□ 0.23
NCKIPSD-209ENST00000470006 SERINC4A6NH21 518 aa16.5■□□□□ 0.23
NCKIPSD-209ENST00000470006 ESPNB1AK53 854 aa16.5■□□□□ 0.23
NCKIPSD-209ENST00000470006 PDLIM1O00151 329 aa16.5■□□□□ 0.23
NCKIPSD-209ENST00000470006 DDX5P17844 614 aaKnown RBP16.5■□□□□ 0.23
NCKIPSD-209ENST00000470006 PGCP20142 388 aa16.5■□□□□ 0.23
NCKIPSD-209ENST00000470006 FRKP42685 505 aaPredicted RBP16.5■□□□□ 0.23
NCKIPSD-209ENST00000470006 ADIPOQQ15848 244 aa16.5■□□□□ 0.23
NCKIPSD-209ENST00000470006 EXOSC6Q5RKV6 272 aaKnown RBP16.5■□□□□ 0.23
NCKIPSD-209ENST00000470006 TSPO2Q5TGU0 170 aa16.5■□□□□ 0.23
NCKIPSD-209ENST00000470006 ZNF563Q8TA94 476 aa16.5■□□□□ 0.23
NCKIPSD-209ENST00000470006 FAM216AQ8WUB2 273 aa16.5■□□□□ 0.23
NCKIPSD-209ENST00000470006 WDR60Q8WVS4 1066 aa16.5■□□□□ 0.23
NCKIPSD-209ENST00000470006 NEU4Q8WWR8 484 aaPredicted RBP16.5■□□□□ 0.23
NCKIPSD-209ENST00000470006 ZNF764Q96H86 408 aaPredicted RBP16.5■□□□□ 0.23
NCKIPSD-209ENST00000470006 SLC38A2Q96QD8 506 aa16.5■□□□□ 0.23
NCKIPSD-209ENST00000470006 LAT2Q9GZY6 243 aa16.5■□□□□ 0.23
NCKIPSD-209ENST00000470006 PLK3Q9H4B4 646 aa16.5■□□□□ 0.23
NCKIPSD-209ENST00000470006 C1orf109Q9NX04 203 aa16.5■□□□□ 0.23
NCKIPSD-209ENST00000470006 IGHV1-18A0A0C4DH31 117 aa16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 SH3PXD2BA1X283 911 aa16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 VSTM5A8MXK1 200 aa16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 B4DSR2 109 aa16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 ETV2O00321 342 aaPredicted RBP16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 PMS2P2O95744 297 aa16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 KRT16P08779 473 aa16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 UBTFL6P0CB48 400 aaPredicted RBP16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 CCNA2P20248 432 aa16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 MPGP29372 298 aa16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 CCT3P49368 545 aaKnown RBP16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 SLC16A1P53985 500 aa16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 KIAA0040Q15053 153 aa16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 GPR68Q15743 365 aa16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 ZCCHC24Q8N2G6 241 aaKnown RBP16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 METTL2AQ96IZ6 378 aaKnown RBP16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 ARL5BQ96KC2 179 aa16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 CCT7Q99832 543 aa16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 RBM4Q9BWF3 364 aaKnown RBP16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 SAP130Q9H0E3 1048 aa16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 CDC42EP4Q9H3Q1 356 aaKnown RBP16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 LPAR2Q9HBW0 351 aa16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 SIRT3Q9NTG7 399 aaPredicted RBP16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 ACER3Q9NUN7 267 aa16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 CHRNA9Q9UGM1 479 aa16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 ZNF180Q9UJW8 692 aa16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 FBXO9Q9UK97 447 aaPredicted RBP16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 SLC9A8Q9Y2E8 581 aa16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 NUP214P35658 2090 aaPredicted RBP16.49■□□□□ 0.23
NCKIPSD-209ENST00000470006 NPIPB9F8W1W9 429 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 hCG_2039718K7EN88 272 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 SLC28A1O00337 649 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 TBX19O60806 448 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 KRT33AO76009 404 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 PDE5AO76074 875 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 CSTAP01040 98 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 SDC1P18827 310 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 APOBEC1P41238 236 aaKnown RBP16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 DEFA6Q01524 100 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 SKP2Q13309 424 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 EFNB3Q15768 340 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 CFAP157Q5JU67 520 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 R3HCC1LQ7Z5L2 792 aaKnown RBP16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 ZNF786Q8N393 782 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 OR56A1Q8NGH5 318 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 UBASH3BQ8TF42 649 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 OR11A1Q9GZK7 315 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 DYNLRB1Q9NP97 96 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 CTPS2Q9NRF8 586 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 ZDHHC18Q9NUE0 388 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 HIF1ANQ9NWT6 349 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 HDGFL3Q9Y3E1 203 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 GRIP1Q9Y3R0 1128 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 PTGDR2Q9Y5Y4 395 aa16.48■□□□□ 0.23
NCKIPSD-209ENST00000470006 LYNX1G3V0Z9 82 aa16.47■□□□□ 0.23
NCKIPSD-209ENST00000470006 LYNX1P0DP58 116 aa16.47■□□□□ 0.23
NCKIPSD-209ENST00000470006 RYKP34925 604 aa16.47■□□□□ 0.23
NCKIPSD-209ENST00000470006 UBE2NP61088 152 aaKnown RBP16.47■□□□□ 0.23
NCKIPSD-209ENST00000470006 RPL38P63173 70 aaKnown RBP16.47■□□□□ 0.23
NCKIPSD-209ENST00000470006 PDE7AQ13946 482 aa16.47■□□□□ 0.23
NCKIPSD-209ENST00000470006 C1QTNF12Q5T7M4 302 aa16.47■□□□□ 0.23
NCKIPSD-209ENST00000470006 DEF8Q6ZN54 512 aa16.47■□□□□ 0.23
NCKIPSD-209ENST00000470006 SVOPLQ8N434 492 aa16.47■□□□□ 0.23
NCKIPSD-209ENST00000470006 JMJD8Q96S16 334 aa16.47■□□□□ 0.23
NCKIPSD-209ENST00000470006 NAA11Q9BSU3 229 aaPredicted RBP16.47■□□□□ 0.23
NCKIPSD-209ENST00000470006 KATNB1Q9BVA0 655 aa16.47■□□□□ 0.23
NCKIPSD-209ENST00000470006 FUT8Q9BYC5 575 aa16.47■□□□□ 0.23
NCKIPSD-209ENST00000470006 KCNF1Q9H3M0 494 aa16.47■□□□□ 0.23
NCKIPSD-209ENST00000470006 NARFLQ9H6Q4 476 aa16.47■□□□□ 0.23
NCKIPSD-209ENST00000470006 FIS1Q9Y3D6 152 aa16.47■□□□□ 0.23
NCKIPSD-209ENST00000470006 FLVCR1Q9Y5Y0 555 aa16.47■□□□□ 0.23
NCKIPSD-209ENST00000470006 NPIPB8E9PQR5 432 aa16.46■□□□□ 0.23
NCKIPSD-209ENST00000470006 H3BQF6 201 aa16.46■□□□□ 0.23
NCKIPSD-209ENST00000470006 ANKRD28O15084 1053 aa16.46■□□□□ 0.23
NCKIPSD-209ENST00000470006 DNPH1O43598 174 aa16.46■□□□□ 0.23
NCKIPSD-209ENST00000470006 UROSP10746 265 aa16.46■□□□□ 0.23
NCKIPSD-209ENST00000470006 HPCAL1P37235 193 aa16.46■□□□□ 0.23
NCKIPSD-209ENST00000470006 ASMTP46597 345 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms