RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 HIST1H2ACQ93077 130 aa9.32□□□□□ -0.92
MSH5-213ENST00000468136 RNFT2Q96EX2 444 aa9.32□□□□□ -0.92
MSH5-213ENST00000468136 DEPDC7Q96QD5 511 aa9.32□□□□□ -0.92
MSH5-213ENST00000468136 MGLLQ99685 303 aa9.32□□□□□ -0.92
MSH5-213ENST00000468136 COQ7Q99807 217 aa9.32□□□□□ -0.92
MSH5-213ENST00000468136 WDR77Q9BQA1 342 aaPredicted RBP9.32□□□□□ -0.92
MSH5-213ENST00000468136 IFT27Q9BW83 186 aa9.32□□□□□ -0.92
MSH5-213ENST00000468136 DEFB126Q9BYW3 111 aa9.32□□□□□ -0.92
MSH5-213ENST00000468136 ULBP3Q9BZM4 244 aa9.32□□□□□ -0.92
MSH5-213ENST00000468136 IRF2BPLQ9H1B7 796 aa9.32□□□□□ -0.92
MSH5-213ENST00000468136 AMBNQ9NP70 447 aa9.32□□□□□ -0.92
MSH5-213ENST00000468136 MMP25Q9NPA2 562 aa9.32□□□□□ -0.92
MSH5-213ENST00000468136 MYOTQ9UBF9 498 aa9.32□□□□□ -0.92
MSH5-213ENST00000468136 AASSQ9UDR5 926 aa9.32□□□□□ -0.92
MSH5-213ENST00000468136 ZNF229Q9UJW7 825 aa9.32□□□□□ -0.92
MSH5-213ENST00000468136 PADI1Q9ULC6 663 aa9.32□□□□□ -0.92
MSH5-213ENST00000468136 CARD8Q9Y2G2 431 aa9.32□□□□□ -0.92
MSH5-213ENST00000468136 PCDHGB7Q9Y5F8 929 aa9.32□□□□□ -0.92
MSH5-213ENST00000468136 A3GALT2U3KPV4 340 aa9.32□□□□□ -0.92
MSH5-213ENST00000468136 IGLV3-32A0A0A0MS00 114 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 ANKUB1A6NFN9 424 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 ETV2O00321 342 aaPredicted RBP9.31□□□□□ -0.92
MSH5-213ENST00000468136 PLD2O14939 933 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 SLC25A12O75746 678 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 CD59P13987 128 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 CXCR1P25024 350 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 NOS3P29474 1203 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 FOLR3P41439 243 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 CENPAP49450 140 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 RGS6P49758 472 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 CLK1P49759 484 aaKnown RBP9.31□□□□□ -0.92
MSH5-213ENST00000468136 CCR4P51679 360 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 EFNA3P52797 238 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 WNT4P56705 351 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 RPS4XP62701 263 aaKnown RBP9.31□□□□□ -0.92
MSH5-213ENST00000468136 ACTC1P68032 377 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 ACTA1P68133 377 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 LSM11P83369 360 aaKnown RBP eCLIP9.31□□□□□ -0.92
MSH5-213ENST00000468136 BDH1Q02338 343 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 ACSM1Q08AH1 577 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 GPR50Q13585 617 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 CD226Q15762 336 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 LPAL2Q16609 132 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 CTF1Q16619 201 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 SLC35D3Q5M8T2 416 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 CLEC12AQ5QGZ9 265 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 CDCP2Q5VXM1 449 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 GPR139Q6DWJ6 353 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 FAAH2Q6GMR7 532 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 C19orf48Q6RUI8 117 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 OPN5Q6U736 354 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 FAM198BQ6UWH4 519 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 USP43Q70EL4 1123 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 MEPCEQ7L2J0 689 aaKnown RBP9.31□□□□□ -0.92
MSH5-213ENST00000468136 CROCCP3Q8IVE0 287 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 OR52I1Q8NGK6 324 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 OR52N1Q8NH53 320 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 HAVCR2Q8TDQ0 301 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 ELP5Q8TE02 316 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 LGALS12Q96DT0 336 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 SNX18Q96RF0 628 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 APMAPQ9HDC9 416 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 ATP13A2Q9NQ11 1180 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 NANSQ9NR45 359 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 C20orf141Q9NUB4 165 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 TAS2R10Q9NYW0 307 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 HIF3AQ9Y2N7 669 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 LOXL2Q9Y4K0 774 aa9.31□□□□□ -0.92
MSH5-213ENST00000468136 TRAV36DV7A0A075B6V5 113 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 CCDC187A0A096LP49 1063 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 A8MVM7 634 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 FAM47E-STBD1D6RA91 191 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 KPNA4O00629 521 aaPredicted RBP9.3□□□□□ -0.92
MSH5-213ENST00000468136 AIREO43918 545 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 ADAM11O75078 769 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 CBFA2T3O75081 653 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 ATE1O95260 518 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 PTHP01270 115 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 IGHA1P01876 353 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 LCKP06239 509 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 FBXO45P0C2W1 286 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 TSPAN19P0C672 248 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 CD53P19397 219 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 GALP22466 123 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 PSMA1P25786 263 aaKnown RBP9.3□□□□□ -0.92
MSH5-213ENST00000468136 ITPKBP27987 946 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 TACR3P29371 465 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 ATP6V1E1P36543 226 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 APOBEC1P41238 236 aaKnown RBP9.3□□□□□ -0.92
MSH5-213ENST00000468136 ZNF117Q03924 483 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 SSPNQ14714 243 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 PCOLCEQ15113 449 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 MED22Q15528 200 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 ZNF74Q16587 644 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 NTRK2Q16620 822 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 C6orf15Q6UXA7 325 aaPredicted RBP9.3□□□□□ -0.92
MSH5-213ENST00000468136 APOOLQ6UXV4 268 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 TMPRSS11AQ6ZMR5 421 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 PRR23CQ6ZRP0 262 aa9.3□□□□□ -0.92
MSH5-213ENST00000468136 SLC16A12Q6ZSM3 486 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms