RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 URI1O94763 535 aaPredicted RBP6.89□□□□□ -1.31
HPS4-207ENST00000459918 VENTXO95231 258 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 CHEK2O96017 543 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 CSTAP01040 98 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 ITGA5P08648 1049 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 SNRPAP09012 282 aaKnown RBP6.89□□□□□ -1.31
HPS4-207ENST00000459918 OR4A8P0C604 315 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 MYL2P10916 166 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 PGCP20142 388 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 IL2RGP31785 369 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 MAP3K8P41279 467 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 IDH3GP51553 393 aaPredicted RBP6.89□□□□□ -1.31
HPS4-207ENST00000459918 PRKAA2P54646 552 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 SESN3P58005 492 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 UBE2NP61088 152 aaKnown RBP6.89□□□□□ -1.31
HPS4-207ENST00000459918 SWI5Q1ZZU3 235 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 GALNTL6Q49A17 601 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 HIKESHIQ53FT3 197 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 ZNF385BQ569K4 471 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.89□□□□□ -1.31
HPS4-207ENST00000459918 TMPPEQ6ZT21 453 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 R3HCC1LQ7Z5L2 792 aaKnown RBP6.89□□□□□ -1.31
HPS4-207ENST00000459918 ABHD12BQ7Z5M8 362 aaPredicted RBP6.89□□□□□ -1.31
HPS4-207ENST00000459918 CCDC63Q8NA47 563 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 NOA1Q8NC60 698 aaKnown RBP6.89□□□□□ -1.31
HPS4-207ENST00000459918 C1orf162Q8NEQ5 155 aaPredicted RBP6.89□□□□□ -1.31
HPS4-207ENST00000459918 OR56A1Q8NGH5 318 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 ZFAND2BQ8WV99 257 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 DCAKDQ8WVC6 231 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 WDR60Q8WVS4 1066 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 ST8SIA1Q92185 356 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 HOXB13Q92826 284 aaPredicted RBP6.89□□□□□ -1.31
HPS4-207ENST00000459918 CCDC126Q96EE4 140 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 L3HYPDHQ96EM0 354 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 MUS81Q96NY9 551 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 JMJD8Q96S16 334 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 CCT7Q99832 543 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 ACTRT3Q9BYD9 372 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 CDC42EP4Q9H3Q1 356 aaKnown RBP6.89□□□□□ -1.31
HPS4-207ENST00000459918 GSTO2Q9H4Y5 243 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 SLC17A5Q9NRA2 495 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 ACSS1Q9NUB1 689 aaPredicted RBP6.89□□□□□ -1.31
HPS4-207ENST00000459918 C1orf109Q9NX04 203 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 GRIP1Q9Y3R0 1128 aa6.89□□□□□ -1.31
HPS4-207ENST00000459918 IGKV3D-15A0A087WSY6 115 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 A0A087WUV0 522 aaPredicted RBP6.88□□□□□ -1.31
HPS4-207ENST00000459918 SERTM1A2A2V5 107 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 SERINC4A6NH21 518 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 ZNF716A6NP11 495 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 B4DSR2 109 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 H3BQF6 201 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 hCG_2039718K7EN88 272 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 SLC28A1O00337 649 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 STAMBPO95630 424 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 UROSP10746 265 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 EGR1P18146 543 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 SDC1P18827 310 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 RYKP34925 604 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 ASMTP46597 345 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 CCT3P49368 545 aaKnown RBP6.88□□□□□ -1.31
HPS4-207ENST00000459918 PPOXP50336 477 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 DVL1P1P54792 670 aaPredicted RBP6.88□□□□□ -1.31
HPS4-207ENST00000459918 CDH15P55291 814 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 FOXG1P55316 489 aaPredicted RBP6.88□□□□□ -1.31
HPS4-207ENST00000459918 SLC25A3Q00325 362 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 IL1RL1Q01638 556 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 LGALS3BPQ08380 585 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 PDK3Q15120 406 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 TRIP10Q15642 601 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 SLC25A53Q5H9E4 307 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 LCE2AQ5TA79 106 aaPredicted RBP6.88□□□□□ -1.31
HPS4-207ENST00000459918 CLEC6AQ6EIG7 209 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 EIF3MQ7L2H7 374 aaKnown RBP6.88□□□□□ -1.31
HPS4-207ENST00000459918 C16orf62Q7Z3J2 963 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 TRIM46Q7Z4K8 759 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 SPATA21Q7Z572 469 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 GPAT4Q86UL3 456 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 LCA5Q86VQ0 697 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 CCDC103Q8IW40 242 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 DDIASQ8IXT1 998 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 SVOPLQ8N434 492 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 OR5D16Q8NGK9 328 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 OR5AK3PQ8NH89 298 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 NEU4Q8WWR8 484 aaPredicted RBP6.88□□□□□ -1.31
HPS4-207ENST00000459918 IFT81Q8WYA0 676 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 C16orf45Q96MC5 204 aaPredicted RBP6.88□□□□□ -1.31
HPS4-207ENST00000459918 SLC38A2Q96QD8 506 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 NAA11Q9BSU3 229 aaPredicted RBP6.88□□□□□ -1.31
HPS4-207ENST00000459918 SAP130Q9H0E3 1048 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 SLC7A10Q9NS82 523 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 CHRNA9Q9UGM1 479 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 BAIAP2L1Q9UHR4 511 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 DCTN4Q9UJW0 460 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 ZNF180Q9UJW8 692 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 FBXO9Q9UK97 447 aaPredicted RBP6.88□□□□□ -1.31
HPS4-207ENST00000459918 PCDHB10Q9UN67 800 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 PTGDR2Q9Y5Y4 395 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 TGP01266 2768 aa6.88□□□□□ -1.31
HPS4-207ENST00000459918 IGHV1-18A0A0C4DH31 117 aa6.87□□□□□ -1.31
HPS4-207ENST00000459918 TMEM114B3SHH9 223 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms