RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 APCP25054 2843 aa20.71■□□□□ 0.91
CBX3-204ENST00000456948 TRBV5-3A0A0A0MS03 114 aa20.71■□□□□ 0.91
CBX3-204ENST00000456948 TMED7-TICAM2A0A0A6YYA0 188 aa20.71■□□□□ 0.91
CBX3-204ENST00000456948 BCAS1O75363 584 aaPredicted RBP20.71■□□□□ 0.91
CBX3-204ENST00000456948 CXCR1P25024 350 aa20.71■□□□□ 0.91
CBX3-204ENST00000456948 DIO1P49895 249 aa20.71■□□□□ 0.91
CBX3-204ENST00000456948 SNTB1Q13884 538 aaKnown RBP20.71■□□□□ 0.91
CBX3-204ENST00000456948 SCARB2Q14108 478 aa20.71■□□□□ 0.91
CBX3-204ENST00000456948 GUSBP1Q15486 140 aa20.71■□□□□ 0.91
CBX3-204ENST00000456948 CYP51A1Q16850 503 aa20.71■□□□□ 0.91
CBX3-204ENST00000456948 BEND4Q6ZU67 534 aa20.71■□□□□ 0.91
CBX3-204ENST00000456948 ZNF610Q8N9Z0 462 aa20.71■□□□□ 0.91
CBX3-204ENST00000456948 NFKBIDQ8NI38 313 aa20.71■□□□□ 0.91
CBX3-204ENST00000456948 ANKRD27Q96NW4 1050 aa20.71■□□□□ 0.91
CBX3-204ENST00000456948 CGREF1Q99674 301 aa20.71■□□□□ 0.91
CBX3-204ENST00000456948 SRXN1Q9BYN0 137 aa20.71■□□□□ 0.91
CBX3-204ENST00000456948 OPN3Q9H1Y3 402 aaPredicted RBP20.71■□□□□ 0.91
CBX3-204ENST00000456948 COQ10BQ9H8M1 238 aa20.71■□□□□ 0.91
CBX3-204ENST00000456948 ANGPT4Q9Y264 503 aa20.71■□□□□ 0.91
CBX3-204ENST00000456948 TMED7Q9Y3B3 224 aa20.71■□□□□ 0.91
CBX3-204ENST00000456948 BBIP1A8MTZ0 92 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 C16orf97H3BN30 126 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 AP3D1O14617 1153 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 ZNF208O43345 1280 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 DNPH1O43598 174 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 NPPAP01160 153 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 YES1P07947 543 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 TACR3P29371 465 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 RBBP4Q09028 425 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 DAZAP2Q15038 168 aaPredicted RBP20.7■□□□□ 0.9
CBX3-204ENST00000456948 COQ5Q5HYK3 327 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 ADGRG3Q86Y34 549 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 SLC30A8Q8IWU4 369 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 CADM2Q8N3J6 435 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 PCYOX1LQ8NBM8 494 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 C11orf65Q8NCR3 313 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 HIPK4Q8NE63 616 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 LINC01560Q8TB33 94 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 ZNF524Q96C55 264 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 KLHL28Q9NXS3 571 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 KLHL13Q9P2N7 655 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 TRAPPC4Q9Y296 219 aa20.7■□□□□ 0.9
CBX3-204ENST00000456948 PMS2P2O95744 297 aa20.69■□□□□ 0.9
CBX3-204ENST00000456948 CGAP01215 116 aa20.69■□□□□ 0.9
CBX3-204ENST00000456948 GKN3PP0CG01 181 aa20.69■□□□□ 0.9
CBX3-204ENST00000456948 CCNA2P20248 432 aa20.69■□□□□ 0.9
CBX3-204ENST00000456948 PRKAR1BP31321 381 aa20.69■□□□□ 0.9
CBX3-204ENST00000456948 MTDHQ86UE4 582 aaKnown RBP20.69■□□□□ 0.9
CBX3-204ENST00000456948 ABHD3Q8WU67 409 aa20.69■□□□□ 0.9
CBX3-204ENST00000456948 CPPED1Q9BRF8 314 aaPredicted RBP20.69■□□□□ 0.9
CBX3-204ENST00000456948 EVA1AQ9H8M9 152 aa20.69■□□□□ 0.9
CBX3-204ENST00000456948 SAR1AQ9NR31 198 aa20.69■□□□□ 0.9
CBX3-204ENST00000456948 ZNF226Q9NYT6 803 aa20.69■□□□□ 0.9
CBX3-204ENST00000456948 TMEM181Q9P2C4 612 aa20.69■□□□□ 0.9
CBX3-204ENST00000456948 RPS6KB2Q9UBS0 482 aa20.69■□□□□ 0.9
CBX3-204ENST00000456948 OSGIN1Q9UJX0 560 aa20.69■□□□□ 0.9
CBX3-204ENST00000456948 SH3D21A4FU49 640 aa20.68■□□□□ 0.9
CBX3-204ENST00000456948 A6NNC1 897 aa20.68■□□□□ 0.9
CBX3-204ENST00000456948 SLC22A2O15244 555 aa20.68■□□□□ 0.9
CBX3-204ENST00000456948 EIF1BO60739 113 aaKnown RBP20.68■□□□□ 0.9
CBX3-204ENST00000456948 AGTR1P30556 359 aa20.68■□□□□ 0.9
CBX3-204ENST00000456948 SLC35A1P78382 337 aa20.68■□□□□ 0.9
CBX3-204ENST00000456948 FAM27E3Q08E93 113 aa20.68■□□□□ 0.9
CBX3-204ENST00000456948 RASGEF1BQ0VAM2 473 aa20.68■□□□□ 0.9
CBX3-204ENST00000456948 SF3A3Q12874 501 aaKnown RBP eCLIP20.68■□□□□ 0.9
CBX3-204ENST00000456948 KLF10Q13118 480 aa20.68■□□□□ 0.9
CBX3-204ENST00000456948 EXOC3L2Q2M3D2 409 aa20.68■□□□□ 0.9
CBX3-204ENST00000456948 ZNF474Q6S9Z5 364 aaPredicted RBP20.68■□□□□ 0.9
CBX3-204ENST00000456948 CLIP4Q8N3C7 705 aa20.68■□□□□ 0.9
CBX3-204ENST00000456948 NAA11Q9BSU3 229 aaPredicted RBP20.68■□□□□ 0.9
CBX3-204ENST00000456948 ADAM19Q9H013 955 aa20.68■□□□□ 0.9
CBX3-204ENST00000456948 GID8Q9NWU2 228 aa20.68■□□□□ 0.9
CBX3-204ENST00000456948 EMC3Q9P0I2 261 aa20.68■□□□□ 0.9
CBX3-204ENST00000456948 DCHS2Q6V1P9 2916 aa20.68■□□□□ 0.9
CBX3-204ENST00000456948 MYO9AB2RTY4 2548 aa20.68■□□□□ 0.9
CBX3-204ENST00000456948 FBN2P35556 2912 aa20.67■□□□□ 0.9
CBX3-204ENST00000456948 CYTIPO60759 359 aa20.67■□□□□ 0.9
CBX3-204ENST00000456948 CCDC22O60826 627 aa20.67■□□□□ 0.9
CBX3-204ENST00000456948 CTAG2O75638 210 aa20.67■□□□□ 0.9
CBX3-204ENST00000456948 TRMT5Q32P41 509 aaKnown RBP20.67■□□□□ 0.9
CBX3-204ENST00000456948 INTS11Q5TA45 600 aaKnown RBP20.67■□□□□ 0.9
CBX3-204ENST00000456948 RETREG3Q86VR2 466 aa20.67■□□□□ 0.9
CBX3-204ENST00000456948 TUSC5Q8IXB3 177 aa20.67■□□□□ 0.9
CBX3-204ENST00000456948 MED18Q9BUE0 208 aa20.67■□□□□ 0.9
CBX3-204ENST00000456948 POLDIP3Q9BY77 421 aaKnown RBP20.67■□□□□ 0.9
CBX3-204ENST00000456948 C12orf49Q9H741 205 aa20.67■□□□□ 0.9
CBX3-204ENST00000456948 CAPN7Q9Y6W3 813 aa20.67■□□□□ 0.9
CBX3-204ENST00000456948 ADAM11O75078 769 aa20.66■□□□□ 0.9
CBX3-204ENST00000456948 FESP07332 822 aa20.66■□□□□ 0.9
CBX3-204ENST00000456948 PPP3CBP16298 524 aa20.66■□□□□ 0.9
CBX3-204ENST00000456948 UGT2B10P36537 528 aa20.66■□□□□ 0.9
CBX3-204ENST00000456948 ACAA2P42765 397 aaKnown RBP20.66■□□□□ 0.9
CBX3-204ENST00000456948 OR2B6P58173 313 aa20.66■□□□□ 0.9
CBX3-204ENST00000456948 NCALDP61601 193 aa20.66■□□□□ 0.9
CBX3-204ENST00000456948 PLAURQ03405 335 aa20.66■□□□□ 0.9
CBX3-204ENST00000456948 CGB2Q6NT52 195 aa20.66■□□□□ 0.9
CBX3-204ENST00000456948 SERPINA11Q86U17 422 aa20.66■□□□□ 0.9
CBX3-204ENST00000456948 ARMC8Q8IUR7 673 aa20.66■□□□□ 0.9
CBX3-204ENST00000456948 PIGXQ8TBF5 258 aa20.66■□□□□ 0.9
CBX3-204ENST00000456948 ZNF317Q96PQ6 595 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms