RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 NCMAPQ5T1S8 102 aa10.98□□□□□ -0.65
SMCR2-201ENST00000456090 ZNF621Q6ZSS3 439 aa10.98□□□□□ -0.65
SMCR2-201ENST00000456090 GRINAQ7Z429 371 aa10.98□□□□□ -0.65
SMCR2-201ENST00000456090 SPATA19Q7Z5L4 167 aa10.98□□□□□ -0.65
SMCR2-201ENST00000456090 GALNT5Q7Z7M9 940 aa10.98□□□□□ -0.65
SMCR2-201ENST00000456090 ATG4DQ86TL0 474 aaPredicted RBP10.98□□□□□ -0.65
SMCR2-201ENST00000456090 ZNF100Q8IYN0 542 aa10.98□□□□□ -0.65
SMCR2-201ENST00000456090 ANKFN1Q8N957 763 aa10.98□□□□□ -0.65
SMCR2-201ENST00000456090 PNPT1Q8TCS8 783 aaKnown RBP10.98□□□□□ -0.65
SMCR2-201ENST00000456090 ARL5BQ96KC2 179 aa10.98□□□□□ -0.65
SMCR2-201ENST00000456090 TRNT1Q96Q11 434 aaKnown RBP10.98□□□□□ -0.65
SMCR2-201ENST00000456090 BDH2Q9BUT1 245 aa10.98□□□□□ -0.65
SMCR2-201ENST00000456090 ESRP2Q9H6T0 727 aaKnown RBP10.98□□□□□ -0.65
SMCR2-201ENST00000456090 WDR55Q9H6Y2 383 aaPredicted RBP10.98□□□□□ -0.65
SMCR2-201ENST00000456090 EXOSC3Q9NQT5 275 aaKnown RBP10.98□□□□□ -0.65
SMCR2-201ENST00000456090 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.98□□□□□ -0.65
SMCR2-201ENST00000456090 LAMP3Q9UQV4 416 aa10.98□□□□□ -0.65
SMCR2-201ENST00000456090 GPR45Q9Y5Y3 372 aa10.98□□□□□ -0.65
SMCR2-201ENST00000456090 SONP18583 2426 aaKnown RBP10.97□□□□□ -0.65
SMCR2-201ENST00000456090 TRPC5OSA6NMA1 111 aa10.97□□□□□ -0.65
SMCR2-201ENST00000456090 LY6G6DO95868 133 aa10.97□□□□□ -0.65
SMCR2-201ENST00000456090 CD3EP07766 207 aa10.97□□□□□ -0.65
SMCR2-201ENST00000456090 PAX1P15863 534 aa10.97□□□□□ -0.65
SMCR2-201ENST00000456090 IDH2P48735 452 aaKnown RBP10.97□□□□□ -0.65
SMCR2-201ENST00000456090 BSPH1Q075Z2 132 aa10.97□□□□□ -0.65
SMCR2-201ENST00000456090 COX20Q5RI15 118 aa10.97□□□□□ -0.65
SMCR2-201ENST00000456090 NXNQ6DKJ4 435 aa10.97□□□□□ -0.65
SMCR2-201ENST00000456090 ABLIM2Q6H8Q1 611 aa10.97□□□□□ -0.65
SMCR2-201ENST00000456090 MTDHQ86UE4 582 aaKnown RBP10.97□□□□□ -0.65
SMCR2-201ENST00000456090 LSRQ86X29 649 aaPredicted RBP10.97□□□□□ -0.65
SMCR2-201ENST00000456090 ADGRG3Q86Y34 549 aa10.97□□□□□ -0.65
SMCR2-201ENST00000456090 LILRB1Q8NHL6 650 aaPredicted RBP10.97□□□□□ -0.65
SMCR2-201ENST00000456090 PIWIL2Q8TC59 973 aaKnown RBP10.97□□□□□ -0.65
SMCR2-201ENST00000456090 CNOT9Q92600 299 aaKnown RBP10.97□□□□□ -0.65
SMCR2-201ENST00000456090 FBXW5Q969U6 566 aa10.97□□□□□ -0.65
SMCR2-201ENST00000456090 ZHX1-C8orf76Q96EF9 292 aa10.97□□□□□ -0.65
SMCR2-201ENST00000456090 ZBTB18Q99592 522 aa10.97□□□□□ -0.65
SMCR2-201ENST00000456090 USB1Q9BQ65 265 aaKnown RBP10.97□□□□□ -0.65
SMCR2-201ENST00000456090 OR11A1Q9GZK7 315 aa10.97□□□□□ -0.65
SMCR2-201ENST00000456090 SLC38A1Q9H2H9 487 aa10.97□□□□□ -0.65
SMCR2-201ENST00000456090 ZNF701Q9NV72 531 aaPredicted RBP10.97□□□□□ -0.65
SMCR2-201ENST00000456090 EMC3Q9P0I2 261 aa10.97□□□□□ -0.65
SMCR2-201ENST00000456090 LIPT1Q9Y234 373 aa10.97□□□□□ -0.65
SMCR2-201ENST00000456090 HDGFL3Q9Y3E1 203 aa10.97□□□□□ -0.65
SMCR2-201ENST00000456090 ABCA1O95477 2261 aa10.97□□□□□ -0.65
SMCR2-201ENST00000456090 IGKV3D-15A0A087WSY6 115 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 AGAP5A6NIR3 686 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 AP3D1O14617 1153 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 TMCC2O75069 709 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 SLC22A3O75751 556 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 CNOT4O95628 575 aaKnown RBP10.96□□□□□ -0.65
SMCR2-201ENST00000456090 PMS2P2O95744 297 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 IGHV3-9P01782 118 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 NR2F1P10589 423 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 IL7RP16871 459 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 CCNA2P20248 432 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 COX5AP20674 150 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 IGHV1-2P23083 117 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 FKBP2P26885 142 aaKnown RBP10.96□□□□□ -0.65
SMCR2-201ENST00000456090 HTR3AP46098 478 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 ANXA11P50995 505 aaKnown RBP10.96□□□□□ -0.65
SMCR2-201ENST00000456090 ATP5J2P56134 94 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 RPS4XP62701 263 aaKnown RBP10.96□□□□□ -0.65
SMCR2-201ENST00000456090 TXNL4AP83876 142 aaKnown RBP10.96□□□□□ -0.65
SMCR2-201ENST00000456090 LRRC74AQ0VAA2 488 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 PPA1Q15181 289 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 ZNF672Q499Z4 452 aaPredicted RBP10.96□□□□□ -0.65
SMCR2-201ENST00000456090 ATG16L1Q676U5 607 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 ADAM5Q6NVV9 412 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 SEZ6L2Q6UXD5 910 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 DNAJC14Q6Y2X3 702 aaPredicted RBP10.96□□□□□ -0.65
SMCR2-201ENST00000456090 LRRC74BQ6ZQY2 392 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 CMIPQ8IY22 773 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 UBE2J2Q8N2K1 259 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 GLB1L3Q8NCI6 653 aaPredicted RBP10.96□□□□□ -0.65
SMCR2-201ENST00000456090 WDR60Q8WVS4 1066 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 NEUROG1Q92886 237 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 SLC6A13Q9NSD5 602 aa10.96□□□□□ -0.65
SMCR2-201ENST00000456090 NOSIPQ9Y314 301 aaKnown RBP10.96□□□□□ -0.65
SMCR2-201ENST00000456090 DPRXA6NFQ7 191 aa10.95□□□□□ -0.66
SMCR2-201ENST00000456090 ZNF716A6NP11 495 aa10.95□□□□□ -0.66
SMCR2-201ENST00000456090 RFXANKO14593 260 aa10.95□□□□□ -0.66
SMCR2-201ENST00000456090 RAMP1O60894 148 aa10.95□□□□□ -0.66
SMCR2-201ENST00000456090 KRT75O95678 551 aa10.95□□□□□ -0.66
SMCR2-201ENST00000456090 IL6P05231 212 aa10.95□□□□□ -0.66
SMCR2-201ENST00000456090 SOD3P08294 240 aa10.95□□□□□ -0.66
SMCR2-201ENST00000456090 IDO1P14902 403 aa10.95□□□□□ -0.66
SMCR2-201ENST00000456090 GGT1P19440 569 aa10.95□□□□□ -0.66
SMCR2-201ENST00000456090 RPS4Y1P22090 263 aaKnown RBP10.95□□□□□ -0.66
SMCR2-201ENST00000456090 CLK1P49759 484 aaKnown RBP10.95□□□□□ -0.66
SMCR2-201ENST00000456090 POLR2HP52434 150 aaKnown RBP10.95□□□□□ -0.66
SMCR2-201ENST00000456090 OR2B6P58173 313 aa10.95□□□□□ -0.66
SMCR2-201ENST00000456090 MAGOHP61326 146 aaKnown RBP10.95□□□□□ -0.66
SMCR2-201ENST00000456090 GNA13Q14344 377 aa10.95□□□□□ -0.66
SMCR2-201ENST00000456090 PDK3Q15120 406 aa10.95□□□□□ -0.66
SMCR2-201ENST00000456090 SLC9B1Q4ZJI4 515 aa10.95□□□□□ -0.66
SMCR2-201ENST00000456090 TIMM23BQ5SRD1 257 aa10.95□□□□□ -0.66
SMCR2-201ENST00000456090 MRPL2Q5T653 305 aaKnown RBP10.95□□□□□ -0.66
SMCR2-201ENST00000456090 CCDC103Q8IW40 242 aa10.95□□□□□ -0.66
SMCR2-201ENST00000456090 KBTBD8Q8NFY9 601 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms