RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 SP140LQ9H930 580 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 FGF21Q9NSA1 209 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 SAMSN1Q9NSI8 373 aaKnown RBP3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 TAS2R9Q9NYW1 312 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 TINAGQ9UJW2 476 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 ING1Q9UK53 422 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 CLEC4EQ9ULY5 219 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 SPATA2Q9UM82 520 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 XDHP47989 1333 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 JCADQ9P266 1359 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 A0A1B0GUS0 222 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 A0A1W2PRF3 423 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 A0A1W2PRM7 423 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 WDR27A2RRH5 827 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 C5orf60A6NFR6 353 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 A8MX80 341 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 PRR32B1ATL7 298 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 F5H6K3 240 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 F8VP50 259 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 M0QXV9 152 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 RGS16O15492 202 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 MLNRO43193 412 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 RBMXL2O75526 392 aaKnown RBP3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZMPSTE24O75844 475 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 NCR1O76036 304 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 NADKO95544 446 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 LATS1O95835 1130 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 TTLL1O95922 423 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 PEX11BO96011 259 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 F10P00742 488 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 PLAUP00749 431 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 CA1P00915 261 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 TNNC2P02585 160 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 APOHP02749 345 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 GCP02774 474 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 WNT1P04628 370 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 ATP1A1P05023 1023 aaKnown RBP3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 HMGN1P05114 100 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 ATF6P18850 670 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 NPR2P20594 1047 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 MAKP20794 623 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 GCAP28676 217 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 MAP3K8P41279 467 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 SLC1A1P43005 524 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 CAPZBP47756 277 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 XKP51811 444 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 TMEM50BP56557 158 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 ARF6P62330 175 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 MGAT3Q09327 533 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 SMARCB1Q12824 385 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 CDC20Q12834 499 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 TRAF2Q12933 501 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 SF3B4Q15427 424 aaKnown RBP eCLIP3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 PPP1R3AQ16821 1122 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 IMPG1Q17R60 797 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 MS4A18Q3C1V0 323 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 LRRC37A5PQ49AS3 106 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 RAB6CQ53S08 254 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 SOHLH1Q5JUK2 328 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 ACSM5Q6NUN0 579 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 LINGO4Q6UY18 593 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 RFPL4BQ6ZWI9 263 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 Q75L30 129 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 FCRLAQ7L513 359 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 UNC93AQ86WB7 457 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 C17orf64Q86WR6 236 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 C10orf67Q8IYJ2 551 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 RELL2Q8NC24 303 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR10A7Q8NGE5 316 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR5T2Q8NGG2 359 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR1B1Q8NGR6 318 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR5R1Q8NH85 324 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 THAP6Q8TBB0 222 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 CNIH3Q8TBE1 160 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 GPR148Q8TDV2 347 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 SLC35F5Q8WV83 523 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 RNF133Q8WVZ7 376 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 TFAP2BQ92481 460 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 TFGQ92734 400 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 DGCR14Q96DF8 476 aaKnown RBP3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 CCDC126Q96EE4 140 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 PACRGQ96M98 296 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 TNFRSF13CQ96RJ3 184 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 GFM1Q96RP9 751 aaKnown RBP3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 CLCC1Q96S66 551 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 CNN2Q99439 309 aaKnown RBP3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 CIB1Q99828 191 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 ECSITQ9BQ95 431 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZNF426Q9BUY5 554 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 RAB6CQ9H0N0 254 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 SYT4Q9H2B2 425 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 AAMDCQ9H7C9 122 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 MOV10Q9HCE1 1003 aaKnown RBP3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 S100A14Q9HCY8 104 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 MLXIPLQ9NP71 852 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 SERTAD4Q9NUC0 356 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 DCAF13Q9NV06 445 aaKnown RBP3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 UVRAGQ9P2Y5 699 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 STOML2Q9UJZ1 356 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 PAM16Q9Y3D7 125 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms