RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 THUMPD3Q9BV44 507 aaKnown RBP11.14□□□□□ -0.63
SSR4-205ENST00000447375 C19orf24Q9BVV8 132 aa11.14□□□□□ -0.63
SSR4-205ENST00000447375 TMEM38AQ9H6F2 299 aa11.14□□□□□ -0.63
SSR4-205ENST00000447375 GALNT8Q9NY28 637 aa11.14□□□□□ -0.63
SSR4-205ENST00000447375 CLCF1Q9UBD9 225 aa11.14□□□□□ -0.63
SSR4-205ENST00000447375 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.14□□□□□ -0.63
SSR4-205ENST00000447375 RNF223E7ERA6 249 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 ADAMDEC1O15204 470 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 CD5LO43866 347 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 CCDC22O60826 627 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 CYP7B1O75881 506 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 PGM3O95394 542 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 NPPAP01160 153 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 THBS1P07996 1170 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 ARAFP10398 606 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 IL7RP16871 459 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 DRD4P21917 467 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 ELK4P28324 431 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 CPA2P48052 419 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 FOXF1Q12946 379 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 NFYCQ13952 458 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 QPRTQ15274 297 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 MAPRE2Q15555 327 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 ZSWIM7Q19AV6 140 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 GCNT6Q5T4J0 391 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 SPATA21Q7Z572 469 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 LUZP2Q86TE4 346 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 UBQLNLQ8IYU4 475 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 TMCO5AQ8N6Q1 288 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 OR52P1PQ8NH57 321 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 FBXO27Q8NI29 283 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 WDR60Q8WVS4 1066 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 ST8SIA1Q92185 356 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 PIK3IP1Q96FE7 263 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 ACER3Q9NUN7 267 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 RLIMQ9NVW2 624 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 PRDM4Q9UKN5 801 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 ZNF232Q9UNY5 417 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 TESMINQ9Y4I5 508 aa11.13□□□□□ -0.63
SSR4-205ENST00000447375 LOC100653049A0A140TA62 436 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 CDHR4A6H8M9 788 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 BBIP1A8MTZ0 92 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 DEFB108AA8MXU0 73 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 SIAH2O43255 324 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 SNX3O60493 162 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 ADAM11O75078 769 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 KRT34O76011 436 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 RCBTB2O95199 551 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 FAM157CP0CG43 387 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 ETS2P15036 469 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 PAX1P15863 534 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 PGCP20142 388 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 IL11P20809 199 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 ME2P23368 584 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 SLC6A8P48029 635 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 CCR4P51679 360 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 SESN3P58005 492 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 EEF1A1P68104 462 aaKnown RBP11.12□□□□□ -0.63
SSR4-205ENST00000447375 CDK6Q00534 326 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 CYLC2Q14093 348 aaPredicted RBP11.12□□□□□ -0.63
SSR4-205ENST00000447375 CTU2Q2VPK5 515 aaKnown RBP11.12□□□□□ -0.63
SSR4-205ENST00000447375 TRMT5Q32P41 509 aaKnown RBP11.12□□□□□ -0.63
SSR4-205ENST00000447375 LIN52Q52LA3 116 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 RPS26P11Q5JNZ5 115 aaPredicted RBP11.12□□□□□ -0.63
SSR4-205ENST00000447375 MRPL2Q5T653 305 aaKnown RBP11.12□□□□□ -0.63
SSR4-205ENST00000447375 RNF220Q5VTB9 566 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 REEP3Q6NUK4 255 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 CHMP1BQ7LBR1 199 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 CPLX4Q7Z7G2 160 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 VRK2Q86Y07 508 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 GRAMD2AQ8IUY3 354 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 LILRA2Q8N149 483 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 C9orf106Q8NAJ2 232 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 BBS10Q8TAM1 723 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 TMEM234Q8WY98 164 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 LRRC58Q96CX6 371 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 ADGRG7Q96K78 797 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 ZFP3Q96NJ6 502 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 TM9SF2Q99805 663 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 AMBRA1Q9C0C7 1298 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 KAT8Q9H7Z6 458 aaKnown RBP11.12□□□□□ -0.63
SSR4-205ENST00000447375 ARMCX1Q9P291 453 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 IFT52Q9Y366 437 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 CAPN7Q9Y6W3 813 aa11.12□□□□□ -0.63
SSR4-205ENST00000447375 A0A0J9YW62 118 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 SLC22A20A6NK97 555 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 C5orf58C9J3I9 102 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 FXYD1O00168 92 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 FAAHO00519 579 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 EIF1AYO14602 144 aaKnown RBP11.11□□□□□ -0.63
SSR4-205ENST00000447375 SEC14L5O43304 696 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 TGM6O95932 706 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 RYKP34925 604 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 MTPNP58546 118 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 RPS3AP61247 264 aaKnown RBP11.11□□□□□ -0.63
SSR4-205ENST00000447375 GNGT1P63211 74 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 SELPLGQ14242 412 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 LARS2Q15031 903 aaKnown RBP11.11□□□□□ -0.63
SSR4-205ENST00000447375 MMEL1Q495T6 779 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 NANOGP8Q6NSW7 305 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms