RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

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Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 UBE2J2Q8N2K1 259 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 DNAJA3Q96EY1 480 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 ARL5BQ96KC2 179 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 TEX37Q96LM6 180 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 LIPT1Q9Y234 373 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 NOSIPQ9Y314 301 aaKnown RBP18.6■□□□□ 0.57
VSX1-206ENST00000444511 HDGFL3Q9Y3E1 203 aa18.6■□□□□ 0.57
VSX1-206ENST00000444511 PRAMEF27A3QJZ7 478 aa18.59■□□□□ 0.57
VSX1-206ENST00000444511 CCDC154A6NI56 674 aa18.59■□□□□ 0.57
VSX1-206ENST00000444511 OVOL3O00110 214 aa18.59■□□□□ 0.57
VSX1-206ENST00000444511 PMS2P2O95744 297 aa18.59■□□□□ 0.57
VSX1-206ENST00000444511 IGHV3-9P01782 118 aa18.59■□□□□ 0.57
VSX1-206ENST00000444511 C1QCP02747 245 aa18.59■□□□□ 0.57
VSX1-206ENST00000444511 ALDOCP09972 364 aaKnown RBP18.59■□□□□ 0.57
VSX1-206ENST00000444511 CCNA2P20248 432 aa18.59■□□□□ 0.57
VSX1-206ENST00000444511 IDH2P48735 452 aaKnown RBP18.59■□□□□ 0.57
VSX1-206ENST00000444511 CLK1P49759 484 aaKnown RBP18.59■□□□□ 0.57
VSX1-206ENST00000444511 TNK1Q13470 666 aa18.59■□□□□ 0.57
VSX1-206ENST00000444511 VEZF1Q14119 521 aa18.59■□□□□ 0.57
VSX1-206ENST00000444511 TNFAIP8L3Q5GJ75 292 aa18.59■□□□□ 0.57
VSX1-206ENST00000444511 SPATA19Q7Z5L4 167 aa18.59■□□□□ 0.57
VSX1-206ENST00000444511 CROCCP2Q86T23 111 aa18.59■□□□□ 0.57
VSX1-206ENST00000444511 P2RY8Q86VZ1 359 aa18.59■□□□□ 0.57
VSX1-206ENST00000444511 ANKRD42Q8N9B4 389 aa18.59■□□□□ 0.57
VSX1-206ENST00000444511 PIGXQ8TBF5 258 aa18.59■□□□□ 0.57
VSX1-206ENST00000444511 CNOT9Q92600 299 aaKnown RBP18.59■□□□□ 0.57
VSX1-206ENST00000444511 APH1AQ96BI3 265 aa18.59■□□□□ 0.57
VSX1-206ENST00000444511 TRNT1Q96Q11 434 aaKnown RBP18.59■□□□□ 0.57
VSX1-206ENST00000444511 ZBTB18Q99592 522 aa18.59■□□□□ 0.57
VSX1-206ENST00000444511 OR11A1Q9GZK7 315 aa18.59■□□□□ 0.57
VSX1-206ENST00000444511 AIG1Q9NVV5 245 aa18.59■□□□□ 0.57
VSX1-206ENST00000444511 MAGED1Q9Y5V3 778 aaPredicted RBP18.59■□□□□ 0.57
VSX1-206ENST00000444511 FN1P02751 2386 aaKnown RBP18.58■□□□□ 0.56
VSX1-206ENST00000444511 OR5H1A6NKK0 313 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 ZNF716A6NP11 495 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 SDHDO14521 159 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 GPR171O14626 319 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 DNPH1O43598 174 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 PGRP06401 933 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 CDKN1AP38936 164 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 HTR3AP46098 478 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 OR2B6P58173 313 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 TXNL4AP83876 142 aaKnown RBP18.58■□□□□ 0.56
VSX1-206ENST00000444511 FAPQ12884 760 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 GNA13Q14344 377 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 ETFDHQ16134 617 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 SYPL1Q16563 259 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 CLEC12BQ2HXU8 276 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 FBXW9Q5XUX1 488 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 ZNF621Q6ZSS3 439 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 ADGRG3Q86Y34 549 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 CMIPQ8IY22 773 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 ZNF433Q8N7K0 673 aaPredicted RBP18.58■□□□□ 0.56
VSX1-206ENST00000444511 ANKFN1Q8N957 763 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 OR52E6Q96RD3 313 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 INPP5KQ9BT40 448 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 TRIM2Q9C040 744 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 ALG2Q9H553 416 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 USF3Q68DE3 2245 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 PRR14LQ5THK1 2151 aa18.58■□□□□ 0.56
VSX1-206ENST00000444511 CIB4A0PJX0 185 aa18.57■□□□□ 0.56
VSX1-206ENST00000444511 CCT8L1PA6NM43 557 aa18.57■□□□□ 0.56
VSX1-206ENST00000444511 INAFM1C9JVW0 142 aa18.57■□□□□ 0.56
VSX1-206ENST00000444511 ADAM11O75078 769 aa18.57■□□□□ 0.56
VSX1-206ENST00000444511 RAD51DO75771 328 aa18.57■□□□□ 0.56
VSX1-206ENST00000444511 PGM3O95394 542 aa18.57■□□□□ 0.56
VSX1-206ENST00000444511 IDUAP35475 653 aa18.57■□□□□ 0.56
VSX1-206ENST00000444511 PLAURQ03405 335 aa18.57■□□□□ 0.56
VSX1-206ENST00000444511 LRRC74AQ0VAA2 488 aa18.57■□□□□ 0.56
VSX1-206ENST00000444511 DNAJC14Q6Y2X3 702 aaPredicted RBP18.57■□□□□ 0.56
VSX1-206ENST00000444511 LRRC74BQ6ZQY2 392 aa18.57■□□□□ 0.56
VSX1-206ENST00000444511 SLC38A1Q9H2H9 487 aa18.57■□□□□ 0.56
VSX1-206ENST00000444511 CISD1Q9NZ45 108 aaKnown RBP18.57■□□□□ 0.56
VSX1-206ENST00000444511 TMEM181Q9P2C4 612 aa18.57■□□□□ 0.56
VSX1-206ENST00000444511 FREM1Q5H8C1 2179 aa18.57■□□□□ 0.56
VSX1-206ENST00000444511 TMED7-TICAM2A0A0A6YYA0 188 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 GOLGA8QA0A0J9YX86 632 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 GOLGA8OA6NCC3 632 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 AGAP5A6NIR3 686 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 GOLGA8NF8WBI6 632 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 AP3D1O14617 1153 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 RAMP1O60894 148 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 MRPL33O75394 65 aaKnown RBP18.56■□□□□ 0.56
VSX1-206ENST00000444511 GSNP06396 782 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 CHRM4P08173 479 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 NR2F1P10589 423 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 EPHA3P29320 983 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 IL12AP29459 219 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 CDKN2CP42773 168 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 MAGEA8P43361 318 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 POLR2HP52434 150 aaKnown RBP18.56■□□□□ 0.56
VSX1-206ENST00000444511 CDH11P55287 796 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 PGGHGQ32M88 737 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 CCDC103Q8IW40 242 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 PNPT1Q8TCS8 783 aaKnown RBP18.56■□□□□ 0.56
VSX1-206ENST00000444511 WDR60Q8WVS4 1066 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 DDIT4LQ96D03 193 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 WDR55Q9H6Y2 383 aaPredicted RBP18.56■□□□□ 0.56
VSX1-206ENST00000444511 MTHFD2LQ9H903 347 aaPredicted RBP18.56■□□□□ 0.56
VSX1-206ENST00000444511 FAIMQ9NVQ4 179 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms