RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 FRRS1Q6ZNA5 592 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 SPATA19Q7Z5L4 167 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 RNF130Q86XS8 419 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 CMIPQ8IY22 773 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 FAM71CQ8NEG0 241 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 WDR60Q8WVS4 1066 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 RADILQ96JH8 1075 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 CCDC115Q96NT0 180 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 TRNT1Q96Q11 434 aaKnown RBP10.42□□□□□ -0.74
TTC28-203ENST00000442232 SORT1Q99523 831 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 NAA11Q9BSU3 229 aaPredicted RBP10.42□□□□□ -0.74
TTC28-203ENST00000442232 CCDC106Q9BWC9 280 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 SAP130Q9H0E3 1048 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 BTNL2Q9UIR0 455 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 POU2F3Q9UKI9 436 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 MGAT4BQ9UQ53 548 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 MAGED1Q9Y5V3 778 aaPredicted RBP10.42□□□□□ -0.74
TTC28-203ENST00000442232 FN1P02751 2386 aaKnown RBP10.41□□□□□ -0.74
TTC28-203ENST00000442232 IGKV3D-15A0A087WSY6 115 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 OR5H1A6NKK0 313 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 TRPC5OSA6NMA1 111 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 INAFM1C9JVW0 142 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 ABCD4O14678 606 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 SCN2BO60939 215 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 MRPL33O75394 65 aaKnown RBP10.41□□□□□ -0.74
TTC28-203ENST00000442232 RAD51DO75771 328 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 KRT75O95678 551 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 SOD3P08294 240 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 DHRS4L1P0CG22 281 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 NR2F1P10589 423 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 IL7RP16871 459 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 CCNA2P20248 432 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 COX5AP20674 150 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 IGHV1-2P23083 117 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 CDKN1AP38936 164 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 IDH2P48735 452 aaKnown RBP10.41□□□□□ -0.74
TTC28-203ENST00000442232 POLR2HP52434 150 aaKnown RBP10.41□□□□□ -0.74
TTC28-203ENST00000442232 KCNJ10P78508 379 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 DMTNQ08495 405 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 TNK1Q13470 666 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 FBXW9Q5XUX1 488 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 NXNQ6DKJ4 435 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 OGFOD2Q6N063 350 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 CASP12Q6UXS9 341 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 ZNF621Q6ZSS3 439 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 DEPDC4Q8N2C3 294 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 PIAS4Q8N2W9 510 aaPredicted RBP10.41□□□□□ -0.74
TTC28-203ENST00000442232 ANKRD42Q8N9B4 389 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 PMM1Q92871 262 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 ZNF524Q96C55 264 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 DNAJA3Q96EY1 480 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 AIG1Q9NVV5 245 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 ASB6Q9NWX5 421 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 TAS2R16Q9NYV7 291 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 CISD1Q9NZ45 108 aaKnown RBP10.41□□□□□ -0.74
TTC28-203ENST00000442232 UPB1Q9UBR1 384 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 HAO1Q9UJM8 370 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 ING1Q9UK53 422 aaPredicted RBP10.41□□□□□ -0.74
TTC28-203ENST00000442232 CADP27708 2225 aa10.41□□□□□ -0.74
TTC28-203ENST00000442232 JMJD1CQ15652 2540 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 TMEM247A6NEH6 219 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 DPRXA6NFQ7 191 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 CCDC154A6NI56 674 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 RNF223E7ERA6 249 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 OVOL3O00110 214 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 HMGN4O00479 90 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 EIF1BO60739 113 aaKnown RBP10.4□□□□□ -0.74
TTC28-203ENST00000442232 IGHV3-9P01782 118 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 DBIP07108 87 aaKnown RBP10.4□□□□□ -0.74
TTC28-203ENST00000442232 DANCRP0C864 163 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 SLC35A1P78382 337 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 CHRNEQ04844 493 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 BST1Q10588 318 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 FUT5Q11128 374 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 NRF1Q16656 503 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 AGAP6Q5VW22 663 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 OR7E24Q6IFN5 339 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 SLC22A25Q6T423 547 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 LRRC74BQ6ZQY2 392 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 HMGN2P46Q86SG4 172 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 PEX5LQ8IYB4 626 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 ZNF440Q8IYI8 595 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 ZNF433Q8N7K0 673 aaPredicted RBP10.4□□□□□ -0.74
TTC28-203ENST00000442232 GLB1L3Q8NCI6 653 aaPredicted RBP10.4□□□□□ -0.74
TTC28-203ENST00000442232 LILRB1Q8NHL6 650 aaPredicted RBP10.4□□□□□ -0.74
TTC28-203ENST00000442232 ZNF75CPQ92670 426 aaPredicted RBP10.4□□□□□ -0.74
TTC28-203ENST00000442232 NEUROG1Q92886 237 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 ADAD1Q96M93 576 aaKnown RBP10.4□□□□□ -0.74
TTC28-203ENST00000442232 OR52E6Q96RD3 313 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 PARD6BQ9BYG5 372 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 TRIM2Q9C040 744 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 OR11A1Q9GZK7 315 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 PNPOQ9NVS9 261 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 PARPBPQ9NWS1 579 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 TMEM181Q9P2C4 612 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 SLC9A8Q9Y2E8 581 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 ZANQ9Y493 2812 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 CSPG4Q6UVK1 2322 aa10.4□□□□□ -0.74
TTC28-203ENST00000442232 CHD3Q12873 2000 aaKnown RBP10.4□□□□□ -0.75
TTC28-203ENST00000442232 TMED7-TICAM2A0A0A6YYA0 188 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms