RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 C9orf40Q8IXQ3 194 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 GPALPP1Q8IXQ4 340 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 OR10G2Q8NGC3 310 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 WDR36Q8NI36 951 aaKnown RBP7.44□□□□□ -1.22
CCDC39-201ENST00000442201 ADIPOR1Q96A54 375 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 ARL5BQ96KC2 179 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 WWTR1Q9GZV5 400 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 DDX28Q9NUL7 540 aaKnown RBP7.44□□□□□ -1.22
CCDC39-201ENST00000442201 COA4Q9NYJ1 87 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 A4GNTQ9UNA3 340 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 SPEGQ15772 3267 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 CDHR4A6H8M9 788 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 PRKNO60260 465 aaPredicted RBP7.43□□□□□ -1.22
CCDC39-201ENST00000442201 ANXA8P13928 327 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 CAPGP40121 348 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 LIMS1P48059 325 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 DAPP51397 102 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 NR0B1P51843 470 aaKnown RBP7.43□□□□□ -1.22
CCDC39-201ENST00000442201 IL1RL1Q01638 556 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 ZSWIM7Q19AV6 140 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 PDZK1Q5T2W1 519 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 STEAP3Q658P3 488 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 ANKRD34AQ69YU3 496 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 C6orf15Q6UXA7 325 aaPredicted RBP7.43□□□□□ -1.22
CCDC39-201ENST00000442201 HSDL2Q6YN16 418 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 USP51Q70EK9 711 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 SLCO6A1Q86UG4 719 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 JAZF1Q86VZ6 243 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 ZSCAN1Q8NBB4 408 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 NFAM1Q8NET5 270 aaPredicted RBP7.43□□□□□ -1.22
CCDC39-201ENST00000442201 TOR3AQ9H497 397 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 EVA1AQ9H8M9 152 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 ZC4H2Q9NQZ6 224 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.43□□□□□ -1.22
CCDC39-201ENST00000442201 CYB5R1Q9UHQ9 305 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 TMEFF2Q9UIK5 374 aaPredicted RBP7.43□□□□□ -1.22
CCDC39-201ENST00000442201 PPIEQ9UNP9 301 aaKnown RBP7.43□□□□□ -1.22
CCDC39-201ENST00000442201 PMS2P1A4D2B8 440 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 NPIPB9F8W1W9 429 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 H0YAE9 185 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 PCDH17O14917 1159 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 CCNB2O95067 398 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 IL33O95760 270 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 POU2F1P14859 743 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 RAB3AP20336 220 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 TAS2R41P59536 307 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF273Q14593 569 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF141Q15928 474 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 C3orf38Q5JPI3 329 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 DCST1Q5T197 706 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 TTC23Q5W5X9 447 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 KDM4DQ6B0I6 523 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 FAHD1Q6P587 224 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 TMEM81Q6P7N7 255 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 RANBP3LQ86VV4 465 aaPredicted RBP7.43□□□□□ -1.22
CCDC39-201ENST00000442201 OFCC1Q8IZS5 231 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 APCDD1LQ8NCL9 501 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 C17orf47Q8NEP4 570 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 OR2Y1Q8NGV0 311 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 C8orf44Q96CB5 159 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 FEVQ99581 238 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 MCHR1Q99705 422 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 WDR77Q9BQA1 342 aaPredicted RBP7.43□□□□□ -1.22
CCDC39-201ENST00000442201 MESP1Q9BRJ9 268 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 SEMA4CQ9C0C4 833 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 NRSN2Q9GZP1 204 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 CTPS2Q9NRF8 586 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 KRT84Q9NSB2 600 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 HSPE1-MOB4S4R3N1 261 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 FER1L5A0AVI2 2057 aa7.43□□□□□ -1.22
CCDC39-201ENST00000442201 A0A1W2PRQ8 180 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 TSPAN4O14817 238 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 TO15178 435 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 REM1O75628 298 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 KLF7O75840 302 aaPredicted RBP7.42□□□□□ -1.22
CCDC39-201ENST00000442201 APOC1P02654 83 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 GNAO1P09471 354 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 HPGDP15428 266 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 ERP29P30040 261 aaKnown RBP7.42□□□□□ -1.22
CCDC39-201ENST00000442201 RNF4P78317 190 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 PSPHP78330 225 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 FLI1Q01543 452 aaPredicted RBP7.42□□□□□ -1.22
CCDC39-201ENST00000442201 KCNAB2Q13303 367 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 DGCR6Q14129 220 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 TSC22D1Q15714 1073 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 SGCAQ16586 387 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 BEND4Q6ZU67 534 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 GALNT5Q7Z7M9 940 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 SVOPQ8N4V2 548 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 SLC5A8Q8N695 610 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF555Q8NEP9 628 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 OR4C3Q8NH37 302 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 OIT3Q8WWZ8 545 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 DACH2Q96NX9 599 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 LMF1Q96S06 567 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 C12orf57Q99622 126 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 LHPPQ9H008 270 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 SLC6A15Q9H2J7 730 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 UBQLN4Q9NRR5 601 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 MUC6Q6W4X9 2439 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms