RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 PGCP20142 388 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 IL11P20809 199 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 GCKP35557 465 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 ACAA2P42765 397 aaKnown RBP6.72□□□□□ -1.33
COPS3-203ENST00000439936 TPD52P55327 224 aaPredicted RBP6.72□□□□□ -1.33
COPS3-203ENST00000439936 SUMO3P55854 103 aaPredicted RBP6.72□□□□□ -1.33
COPS3-203ENST00000439936 CLDN18P56856 261 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 CLDN20P56880 219 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 SESN3P58005 492 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 EEF1A1P68104 462 aaKnown RBP6.72□□□□□ -1.33
COPS3-203ENST00000439936 ADORA2A-AS1P86434 159 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 ART3Q13508 389 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 LARS2Q15031 903 aaKnown RBP6.72□□□□□ -1.33
COPS3-203ENST00000439936 QPRTQ15274 297 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 MSMPQ1L6U9 139 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 SLC25A53Q5H9E4 307 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 ZNF311Q5JNZ3 666 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 MRPL2Q5T653 305 aaKnown RBP6.72□□□□□ -1.33
COPS3-203ENST00000439936 GKAP1Q5VSY0 366 aaPredicted RBP6.72□□□□□ -1.33
COPS3-203ENST00000439936 C8orf82Q6P1X6 216 aaPredicted RBP6.72□□□□□ -1.33
COPS3-203ENST00000439936 RPTNQ6XPR3 784 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 SERPINA11Q86U17 422 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 GRAMD2AQ8IUY3 354 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 SLC15A3Q8IY34 581 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 PM20D2Q8IYS1 436 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 GTPBP8Q8N3Z3 284 aaPredicted RBP6.72□□□□□ -1.33
COPS3-203ENST00000439936 FITM2Q8N6M3 262 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 TMCO5AQ8N6Q1 288 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 C11orf65Q8NCR3 313 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 HIPK4Q8NE63 616 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 OR8J3Q8NGG0 315 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 ZPLD1Q8TCW7 415 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 SSC4DQ8WTU2 575 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 ZBTB8AQ96BR9 441 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 CCDC120Q96HB5 630 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 RNF145Q96MT1 663 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 ZNF607Q96SK3 696 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 HOPXQ9BPY8 73 aaPredicted RBP6.72□□□□□ -1.33
COPS3-203ENST00000439936 TUBA1CQ9BQE3 449 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 GPATCH1Q9BRR8 931 aaKnown RBP6.72□□□□□ -1.33
COPS3-203ENST00000439936 TTYH2Q9BSA4 534 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 SPATA9Q9BWV2 254 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 EXOSC3Q9NQT5 275 aaKnown RBP6.72□□□□□ -1.33
COPS3-203ENST00000439936 CMTM6Q9NX76 183 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 ZNF443Q9Y2A4 671 aaPredicted RBP6.72□□□□□ -1.33
COPS3-203ENST00000439936 FAM215AQ9Y5M1 114 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 AP4B1Q9Y6B7 739 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 MPDZO75970 2070 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 A0A0J9YW62 118 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 C7orf72A4D263 438 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 CDHR4A6H8M9 788 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 SLC22A31A6NKX4 558 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 FAM47E-STBD1D6RA91 191 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 H3BML4 177 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 ETV2O00321 342 aaPredicted RBP6.71□□□□□ -1.33
COPS3-203ENST00000439936 AP3D1O14617 1153 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 TOXO94900 526 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 MFN2O95140 757 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 NTN1O95631 604 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 GKN3PP0CG01 181 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 GLI4P10075 376 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 GP1BBP13224 206 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 PRG2P13727 222 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 AQP1P29972 269 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 EIF1P41567 113 aaKnown RBP6.71□□□□□ -1.33
COPS3-203ENST00000439936 CPA2P48052 419 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 IDH2P48735 452 aaKnown RBP6.71□□□□□ -1.33
COPS3-203ENST00000439936 CCR4P51679 360 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 PER3P56645 1201 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 PCBP3P57721 371 aaKnown RBP6.71□□□□□ -1.33
COPS3-203ENST00000439936 NUP107P57740 925 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 EPS8Q12929 822 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 FOXF1Q12946 379 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 CBFBQ13951 182 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 SF3B4Q15427 424 aaKnown RBP eCLIP6.71□□□□□ -1.332e-6■■■□□ 16.9
COPS3-203ENST00000439936 DUSP7Q16829 419 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 CYP51A1Q16850 503 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 ZSWIM7Q19AV6 140 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 VMACQ2NL98 169 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 LIN52Q52LA3 116 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 C1orf185Q5T7R7 199 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 NSUN5P2Q63ZY6 315 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 FAM91A1Q658Y4 838 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 MTFR2Q6P444 385 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 XKRXQ6PP77 449 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 PLXDC2Q6UX71 529 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 HACD2Q6Y1H2 254 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 B3GNT6Q6ZMB0 384 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 ZNF836Q6ZNA1 936 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 SEM1Q6ZVN7 128 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 MRGPRGQ86SM5 289 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 ADGRE4PQ86SQ3 457 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 ADGRG3Q86Y34 549 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 KRT73Q86Y46 540 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 ZNF440Q8IYI8 595 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 UBQLNLQ8IYU4 475 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 EID3Q8N140 333 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 LILRA2Q8N149 483 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 CCDC197Q8NCU1 140 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 OR10Q1Q8NGQ4 319 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms