RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 INPP5KQ9BT40 448 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 DPEP2Q9H4A9 486 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 APMAPQ9HDC9 416 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 WDR35Q9P2L0 1181 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 EIF3LQ9Y262 564 aaKnown RBP1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 NCKAP1Q9Y2A7 1128 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 SORL1Q92673 2214 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 SLC5A10A0PJK1 596 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 C5orf63A6NC05 138 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 C16orf90A8MZG2 172 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 C21orf140B9A014 251 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 NPIPA3F8WFD2 350 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 PGRMC2O15173 223 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 RNF113AO15541 343 aaKnown RBP1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 SLC7A4O43246 635 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 PRAF2O60831 178 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 HSPA4LO95757 839 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 TGFAP01135 160 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 IGHG3P01860 377 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 IGHDP01880 384 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 GBAP04062 536 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 VIMP08670 466 aaKnown RBP1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 ANKRD34CP0C6C1 535 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 ZNF853P0CG23 659 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 RPS2P15880 293 aaKnown RBP1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 GDF1P27539 372 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 NMT1P30419 496 aaKnown RBP1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 KIF5BP33176 963 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 SOAT1P35610 550 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 FNTAP49354 379 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 RGS7P49802 495 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 CCR8P51685 355 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 CAPZA1P52907 286 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 PPP5CP53041 499 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 MFAP3P55082 362 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 LOXL1Q08397 574 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 CAMK2DQ13557 499 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 ZNF273Q14593 569 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 PPA1Q15181 289 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 C17orf58Q2M2W7 97 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 RFTN2Q52LD8 501 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 TOR1AIP1Q5JTV8 583 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 ATL3Q6DD88 541 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 NEPROQ6NW34 567 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 LEG1Q6P5S2 330 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 ZCCHC12Q6PEW1 402 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 TIFABQ6ZNK6 161 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 ABI3BPQ7Z7G0 1075 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 NT5DC3Q86UY8 548 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 SLC22A18ASQ8N1D0 253 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 SVOPLQ8N434 492 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 ARL10Q8N8L6 244 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 SNX31Q8N9S9 440 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 PSMG2Q969U7 264 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 DYNLL2Q96FJ2 89 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 ITCHQ96J02 903 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 MAGEB18Q96M61 343 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 AK8Q96MA6 479 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 JAKMIP1Q96N16 626 aaKnown RBP1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 PLEKHF1Q96S99 279 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 CITED2Q99967 270 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 C5orf66Q9H5L9 145 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 ESM1Q9NQ30 184 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 PDRG1Q9NUG6 133 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 LEF1Q9UJU2 399 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 UBQLN1Q9UMX0 589 aaKnown RBP1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 ABCG2Q9UNQ0 655 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 MOKQ9UQ07 419 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 PPIAL4AQ9Y536 164 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 LIPGQ9Y5X9 500 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 ZNF407Q9C0G0 2248 aa1.82□□□□□ -2.12
HMGB1P18-201ENST00000438801 NCKAP5O14513 1909 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 IGHV5-10-1A0A0J9YXX1 117 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 TRIM64CA6NLI5 447 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 ZNF732B4DXR9 585 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 PRSS46E5RG02 174 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 PGLSO95336 258 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 CPNE6O95741 557 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 OMGP23515 440 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 PTPN4P29074 926 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 MAT2AP31153 395 aaKnown RBP1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 ALDH3B1P43353 468 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 TNNT3P45378 269 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 NPY4RP50391 375 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 SLC25A1P53007 311 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 RPS15P62841 145 aaKnown RBP1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 UBXN1Q04323 297 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 SPAG1Q07617 926 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 MFGE8Q08431 387 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 TAZQ16635 292 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 LRRC73Q5JTD7 316 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 ZNF544Q6NX49 715 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 SLC27A4Q6P1M0 643 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 CNSTQ6PJW8 725 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 SYT10Q6XYQ8 523 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 PPP1R21Q6ZMI0 780 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 RFPL4BQ6ZWI9 263 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 CENPQQ7L2Z9 268 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 SPATA21Q7Z572 469 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms