RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 MRPL33O75394 65 aaKnown RBP13.09□□□□□ -0.31
PRKDC-203ENST00000432581 UGT2B17O75795 530 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 PMS2P2O95744 297 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 AGR2O95994 175 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 F12P00748 615 aaPredicted RBP13.09□□□□□ -0.31
PRKDC-203ENST00000432581 GUSBP08236 651 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 SERPINB5P36952 375 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 CLK1P49759 484 aaKnown RBP13.09□□□□□ -0.31
PRKDC-203ENST00000432581 SLC16A1P53985 500 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 RPS26P62854 115 aaKnown RBP13.09□□□□□ -0.31
PRKDC-203ENST00000432581 C1QTNF12Q5T7M4 302 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 CYB5R2Q6BCY4 276 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 C16orf62Q7Z3J2 963 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 C6orf120Q7Z4R8 191 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 ALPK2Q86TB3 2170 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 GSPT2Q8IYD1 628 aaKnown RBP13.09□□□□□ -0.31
PRKDC-203ENST00000432581 ZNF525Q8N782 197 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 KIF18AQ8NI77 898 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 AGR3Q8TD06 166 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 PROX1Q92786 737 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 APOPT1Q96IL0 206 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 SLC35G5Q96KT7 338 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 MUS81Q96NY9 551 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 INPP5KQ9BT40 448 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 CCDC106Q9BWC9 280 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 SERHL2Q9H4I8 314 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 POLE3Q9NRF9 147 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 MKLN1Q9UL63 735 aa13.09□□□□□ -0.31
PRKDC-203ENST00000432581 CENPVL1A0A0U1RR11 272 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 RNF103-CHMP3A0A140T963 221 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 M0R1B8 84 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 KIAA0513O60268 411 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 PGM1P36871 562 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 MAGEA8P43361 318 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 EFNA4P52798 201 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 CHRNB3Q05901 458 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 SPOCK1Q08629 439 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 MAD2L1Q13257 205 aaPredicted RBP13.08□□□□□ -0.32
PRKDC-203ENST00000432581 GABRA6Q16445 453 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 ATAD3BQ5T9A4 648 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 B3GLCTQ6Y288 498 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 GRINAQ7Z429 371 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 C17orf78Q8N4C9 275 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 FAM71CQ8NEG0 241 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 ZNF563Q8TA94 476 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 MIPOL1Q8TD10 442 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 TUBGCP3Q96CW5 907 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 C3orf30Q96M34 536 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 MECRQ9BV79 373 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 AMBRA1Q9C0C7 1298 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 SHARPINQ9H0F6 387 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 MANSC1Q9H8J5 431 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 FKRPQ9H9S5 495 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 CTPS2Q9NRF8 586 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 PMF1-BGLAPU3KQ54 211 aa13.08□□□□□ -0.32
PRKDC-203ENST00000432581 RNASET2O00584 256 aaKnown RBP13.07□□□□□ -0.32
PRKDC-203ENST00000432581 G6PDP11413 515 aa13.07□□□□□ -0.32
PRKDC-203ENST00000432581 THBS2P35442 1172 aa13.07□□□□□ -0.32
PRKDC-203ENST00000432581 CLDN8P56748 225 aa13.07□□□□□ -0.32
PRKDC-203ENST00000432581 PGS1Q32NB8 556 aa13.07□□□□□ -0.32
PRKDC-203ENST00000432581 C1orf162Q8NEQ5 155 aaPredicted RBP13.07□□□□□ -0.32
PRKDC-203ENST00000432581 C10orf105Q8TEF2 133 aa13.07□□□□□ -0.32
PRKDC-203ENST00000432581 EXOSC3Q9NQT5 275 aaKnown RBP13.07□□□□□ -0.32
PRKDC-203ENST00000432581 PARPBPQ9NWS1 579 aa13.07□□□□□ -0.32
PRKDC-203ENST00000432581 DCTN4Q9UJW0 460 aa13.07□□□□□ -0.32
PRKDC-203ENST00000432581 PCDHGB4Q9UN71 923 aa13.07□□□□□ -0.32
PRKDC-203ENST00000432581 AMDHD2Q9Y303 409 aa13.07□□□□□ -0.32
PRKDC-203ENST00000432581 WDR45Q9Y484 360 aa13.07□□□□□ -0.32
PRKDC-203ENST00000432581 ATP23Q9Y6H3 246 aa13.07□□□□□ -0.32
PRKDC-203ENST00000432581 A0A1W2PR80 420 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 PDLIM1O00151 329 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 EIF1BO60739 113 aaKnown RBP13.06□□□□□ -0.32
PRKDC-203ENST00000432581 SKAP2O75563 359 aaPredicted RBP13.06□□□□□ -0.32
PRKDC-203ENST00000432581 ITGA5P08648 1049 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 IGHV4-31P0DP07 118 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 USF1P22415 310 aaPredicted RBP13.06□□□□□ -0.32
PRKDC-203ENST00000432581 APOBEC3AP31941 199 aaPredicted RBP13.06□□□□□ -0.32
PRKDC-203ENST00000432581 NTF4P34130 210 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 RYKP34925 604 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 HTR3AP46098 478 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 OR2B6P58173 313 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 TGFBR3Q03167 851 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 EMX2Q04743 252 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 MAPK14Q16539 360 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 AP1ARQ63HQ0 302 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 CASP12Q6UXS9 341 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 ZCCHC23Q6ZST2 131 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 CLECL1Q8IZS7 167 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 OR4A15Q8NGL6 344 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 HTRA1Q92743 480 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 ARL5BQ96KC2 179 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 OR51I1Q9H343 314 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 ASIC5Q9NY37 505 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 NOP53Q9NZM5 478 aaKnown RBP13.06□□□□□ -0.32
PRKDC-203ENST00000432581 TMEM181Q9P2C4 612 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 UPB1Q9UBR1 384 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 ZDHHC2Q9UIJ5 367 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 TRAPPC4Q9Y296 219 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 SLC9A8Q9Y2E8 581 aa13.06□□□□□ -0.32
PRKDC-203ENST00000432581 OR12D1P0DN82 309 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms