RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 POTEKPQ9BYX7 375 aa10.41□□□□□ -0.74
HDAC4-202ENST00000430200 OR10A4Q9H209 315 aa10.41□□□□□ -0.74
HDAC4-202ENST00000430200 GP6Q9HCN6 339 aa10.41□□□□□ -0.74
HDAC4-202ENST00000430200 KLHL9Q9P2J3 617 aa10.41□□□□□ -0.74
HDAC4-202ENST00000430200 CHRNA9Q9UGM1 479 aa10.41□□□□□ -0.74
HDAC4-202ENST00000430200 RNF115Q9Y4L5 304 aa10.41□□□□□ -0.74
HDAC4-202ENST00000430200 MAGED1Q9Y5V3 778 aaPredicted RBP10.41□□□□□ -0.74
HDAC4-202ENST00000430200 HIVEP2P31629 2446 aa10.41□□□□□ -0.74
HDAC4-202ENST00000430200 ABCA1O95477 2261 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 IGKV3D-15A0A087WSY6 115 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 TMEM72A0PK05 275 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 AGAP5A6NIR3 686 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 CLOCKO15516 846 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 SOX30O94993 753 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 THBS1P07996 1170 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 ETFAP13804 333 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 PAX1P15863 534 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 PGCP20142 388 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 PTNP21246 168 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 IL32P24001 234 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 CDKN1AP38936 164 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 DPY19L1Q2PZI1 675 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 PGGHGQ32M88 737 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 MRPL2Q5T653 305 aaKnown RBP10.4□□□□□ -0.74
HDAC4-202ENST00000430200 ANXA8L1Q5VT79 327 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 B3GLCTQ6Y288 498 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 ZNF836Q6ZNA1 936 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 TMPPEQ6ZT21 453 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 PRIMA1Q86XR5 153 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 HOMEZQ8IX15 550 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 LRRC34Q8IZ02 419 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 C10orf111Q8N326 155 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 MAPK1IP1LQ8NDC0 245 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 STEAP2Q8NFT2 490 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 PIWIL2Q8TC59 973 aaKnown RBP10.4□□□□□ -0.74
HDAC4-202ENST00000430200 REXO5Q96IC2 774 aaKnown RBP10.4□□□□□ -0.74
HDAC4-202ENST00000430200 PANX1Q96RD7 426 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 TRIM2Q9C040 744 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 TIGARQ9NQ88 270 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 EXOSC3Q9NQT5 275 aaKnown RBP10.4□□□□□ -0.74
HDAC4-202ENST00000430200 POLE3Q9NRF9 147 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 EXD2Q9NVH0 621 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 RLIMQ9NVW2 624 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 LAMP3Q9UQV4 416 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 SLC35A3Q9Y2D2 325 aa10.4□□□□□ -0.74
HDAC4-202ENST00000430200 ATRQ13535 2644 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 ALPK2Q86TB3 2170 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 A0A1W2PR80 420 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 ZNF724A8MTY0 619 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 SHISA9B4DS77 424 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 OVOL3O00110 214 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 SULT2B1O00204 365 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 HDAC3O15379 428 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 CNOT4O95628 575 aaKnown RBP10.39□□□□□ -0.75
HDAC4-202ENST00000430200 ITGA5P08648 1049 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 PABPC4LP0CB38 370 aaKnown RBP10.39□□□□□ -0.75
HDAC4-202ENST00000430200 PRG2P13727 222 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 IDH2P48735 452 aaKnown RBP10.39□□□□□ -0.75
HDAC4-202ENST00000430200 MAGOHP61326 146 aaKnown RBP10.39□□□□□ -0.75
HDAC4-202ENST00000430200 KCNJ10P78508 379 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 ITGADQ13349 1161 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 STK11Q15831 433 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 ATAD3BQ5T9A4 648 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 HHATQ5VTY9 493 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 PRSS57Q6UWY2 283 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 GRINAQ7Z429 371 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 COMTD1Q86VU5 262 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 VRK2Q86Y07 508 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 SLC43A2Q8N370 569 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 ZNF433Q8N7K0 673 aaPredicted RBP10.39□□□□□ -0.75
HDAC4-202ENST00000430200 TRNT1Q96Q11 434 aaKnown RBP10.39□□□□□ -0.75
HDAC4-202ENST00000430200 OR52E6Q96RD3 313 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 OSGIN1Q9UJX0 560 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 PCDHGB4Q9UN71 923 aa10.39□□□□□ -0.75
HDAC4-202ENST00000430200 TMED7-TICAM2A0A0A6YYA0 188 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 PDLIM1O00151 329 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 ARHGEF9O43307 516 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 RAD51DO75771 328 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 PMS2P2O95744 297 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 CD8AP01732 235 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 IGHV4-39P01824 125 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 NUDT7P0C024 238 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 GKN3PP0CG01 181 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 TFPIP10646 304 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 TACR3P29371 465 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 SLC16A1P53985 500 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 H3F3AP84243 136 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 EPS8Q12929 822 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 TNK1Q13470 666 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 P2RY6Q15077 328 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 ZNF672Q499Z4 452 aaPredicted RBP10.38□□□□□ -0.75
HDAC4-202ENST00000430200 PDCD4Q53EL6 469 aaKnown RBP10.38□□□□□ -0.75
HDAC4-202ENST00000430200 GTF2IRD2BQ6EKJ0 949 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 SPATA19Q7Z5L4 167 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 MTDHQ86UE4 582 aaKnown RBP10.38□□□□□ -0.75
HDAC4-202ENST00000430200 GTF2IRD2Q86UP8 949 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 MSRB3Q8IXL7 192 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 ARFGAP2Q8N6H7 521 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 OR52E4Q8NGH9 312 aa10.38□□□□□ -0.75
HDAC4-202ENST00000430200 ZNF563Q8TA94 476 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms