RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 CHDHQ8NE62 594 aaPredicted RBP23.33■■□□□ 1.33
SPIRE1-202ENST00000409402 BCL7BQ9BQE9 202 aa23.33■■□□□ 1.33
SPIRE1-202ENST00000409402 B4DXG7 233 aa23.33■■□□□ 1.33
SPIRE1-202ENST00000409402 SERPINE2P07093 398 aa23.33■■□□□ 1.33
SPIRE1-202ENST00000409402 EFNA3P52797 238 aa23.33■■□□□ 1.33
SPIRE1-202ENST00000409402 MAFAQ8NHW3 353 aaPredicted RBP23.33■■□□□ 1.33
SPIRE1-202ENST00000409402 SUN5Q8TC36 379 aa23.33■■□□□ 1.33
SPIRE1-202ENST00000409402 B8ZZF3 427 aa23.33■■□□□ 1.32
SPIRE1-202ENST00000409402 NKPD1Q17RQ9 610 aa23.33■■□□□ 1.32
SPIRE1-202ENST00000409402 RSPO2Q6UXX9 243 aaPredicted RBP23.33■■□□□ 1.32
SPIRE1-202ENST00000409402 VRK1Q99986 396 aaPredicted RBP23.33■■□□□ 1.32
SPIRE1-202ENST00000409402 FGF22Q9HCT0 170 aa23.33■■□□□ 1.32
SPIRE1-202ENST00000409402 A0A1W2PQL4 384 aaPredicted RBP23.33■■□□□ 1.32
SPIRE1-202ENST00000409402 FURINP09958 794 aa23.33■■□□□ 1.32
SPIRE1-202ENST00000409402 DNASE1P24855 282 aa23.33■■□□□ 1.32
SPIRE1-202ENST00000409402 LTB4RQ15722 352 aa23.33■■□□□ 1.32
SPIRE1-202ENST00000409402 ACSM3Q53FZ2 586 aa23.33■■□□□ 1.32
SPIRE1-202ENST00000409402 SPIN2AQ99865 258 aa23.33■■□□□ 1.32
SPIRE1-202ENST00000409402 SPIN2BQ9BPZ2 258 aa23.33■■□□□ 1.32
SPIRE1-202ENST00000409402 LHPPQ9H008 270 aa23.33■■□□□ 1.32
SPIRE1-202ENST00000409402 APMAPQ9HDC9 416 aa23.33■■□□□ 1.32
SPIRE1-202ENST00000409402 SLX4Q8IY92 1834 aa23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 GLULP15104 373 aa23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 SEMA3BQ13214 749 aa23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 METRNLQ641Q3 311 aa23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 FAM57BQ71RH2 274 aa23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 VHLLQ6RSH7 139 aa23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 SGPP2Q8IWX5 399 aa23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 FNDC8Q8TC99 324 aa23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 ELOVL3Q9HB03 270 aa23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 GABRA2P47869 451 aa23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 SLC7A13Q8TCU3 470 aa23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 PHB2Q99623 299 aa23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 F10P00742 488 aa23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 ALDOCP09972 364 aaKnown RBP23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 CCR5P51681 352 aa23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 SIRPAP78324 504 aa23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 SLC36A2Q495M3 483 aa23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 YOD1Q5VVQ6 348 aaPredicted RBP23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 ZNF775Q96BV0 537 aaPredicted RBP23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 TM4SF18Q96CE8 201 aa23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 CALHM2Q9HA72 323 aa23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 AGPAT4Q9NRZ5 378 aa23.32■■□□□ 1.32
SPIRE1-202ENST00000409402 TMED7-TICAM2A0A0A6YYA0 188 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 EIF1BO60739 113 aaKnown RBP23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 ITGB2P05107 769 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 ITGAMP11215 1152 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 EPHA1P21709 976 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 GABRB3P28472 473 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 RTL6Q6ICC9 239 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 FBXO27Q8NI29 283 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 TMED7Q9Y3B3 224 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 MYH9P35579 1960 aaKnown RBP23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 TRAV36DV7A0A075B6V5 113 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 AP1G1O43747 822 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 SORBS2O94875 1100 aaKnown RBP23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 EIF2S3LQ2VIR3 472 aaKnown RBP23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 RAB31Q13636 194 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 OR13C2Q8NGS9 318 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 MYH4Q9Y623 1939 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 CSF1P09603 554 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 TSPAN31Q12999 210 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 CAMK2DQ13557 499 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 ZNF845Q96IR2 970 aaPredicted RBP23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 EBF1Q9UH73 591 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 TOGARAM1Q9Y4F4 1720 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 I3L521 148 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 BMXP51813 675 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 TAS2R31P59538 309 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 RPP30P78346 268 aaKnown RBP23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 OR7E24Q6IFN5 339 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 ABHD17CQ6PCB6 329 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 KCTD20Q7Z5Y7 419 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 TEX19Q8NA77 164 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 STEAP2Q8NFT2 490 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 SNAPC3Q92966 411 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 CDCP1Q9H5V8 836 aa23.31■■□□□ 1.32
SPIRE1-202ENST00000409402 MAOAP21397 527 aa23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 PYCR3Q53H96 274 aa23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 SLC48A1Q6P1K1 146 aa23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 MAELQ96JY0 434 aaKnown RBP23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 CPPED1Q9BRF8 314 aaPredicted RBP23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 P2RY14Q15391 338 aa23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 SBSNQ6UWP8 590 aa23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 GDPD1Q8N9F7 314 aa23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 OR4K15Q8NH41 348 aa23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 FAM155AB1AL88 458 aaPredicted RBP23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 TIMM8AO60220 97 aaPredicted RBP23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 OPRD1P41143 372 aa23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 ZNF740Q8NDX6 193 aa23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 SLC38A5Q8WUX1 472 aa23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 MYH10P35580 1976 aa23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 SHISA7A6NL88 538 aa23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 RAB3DO95716 219 aa23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 SEC61A1P61619 476 aaKnown RBP23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 RIPPLY1Q0D2K3 151 aa23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 SLC22A6Q4U2R8 563 aa23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 MAST2Q6P0Q8 1798 aa23.3■■□□□ 1.32
SPIRE1-202ENST00000409402 J3KTA2 159 aa23.29■■□□□ 1.32
SPIRE1-202ENST00000409402 MRPL58Q14197 206 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms