RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 ATP1B3P54709 279 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 FABP9Q0Z7S8 132 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 NKPD1Q17RQ9 610 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 PRAMEF14Q5SWL7 426 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 MAB21L3Q8N8X9 362 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 ACTR3CQ9C0K3 210 aaPredicted RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 RNF19AQ9NV58 838 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 POLLQ9UGP5 575 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 ASXL2Q76L83 1435 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 ADAM20O43506 726 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 CH25HO95992 272 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 KLK7P49862 253 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 SNRPD2P62316 118 aaKnown RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 RAET1LQ5VY80 246 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 GPR148Q8TDV2 347 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 BCL2L2Q92843 193 aaPredicted RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 TOE1Q96GM8 510 aaKnown RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 OR14J1Q9UGF5 321 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 HIDE1A8MVS5 230 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 RHBDL3P58872 404 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 CNTN2Q02246 1040 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 TATDN3Q17R31 274 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 KHDC1LQ5JSQ8 128 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 ZNF571Q7Z3V5 609 aaPredicted RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 CMTM4Q8IZR5 234 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 ARRDC3Q96B67 414 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 ACSM1Q08AH1 577 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 SPHARQ15513 63 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 HIST3H3Q16695 136 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 OR4K2Q8NGD2 314 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 DUSP19Q8WTR2 217 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 MMABQ96EY8 250 aaPredicted RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 GLCEO94923 617 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 MYF6P23409 242 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 PDZK1IP1Q13113 114 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 PPM1JQ5JR12 505 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 LCN10Q6JVE6 187 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 CHADLQ6NUI6 762 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 DNERQ8NFT8 737 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 SHDQ96IW2 340 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 ZNF317Q96PQ6 595 aaPredicted RBP8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 MRPL37Q9BZE1 423 aaKnown RBP8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 ARHGEF11O15085 1522 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 A0A1W2PQL4 384 aaPredicted RBP8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 INSRRP14616 1297 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 NECTIN1Q15223 517 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 TESK1Q15569 626 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 Q6ZN92 141 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 SOCS4Q8WXH5 440 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 RCL1Q9Y2P8 373 aaKnown RBP8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 DENND4BO75064 1496 aaPredicted RBP8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 TRAV20A0A0B4J274 112 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 RAB27BO00194 218 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 ARSDP51689 593 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 ZNF141Q15928 474 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 OR10G3Q8NGC4 313 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 PPTC7Q8NI37 304 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 SDCBP2Q9H190 292 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 OR6C2Q9NZP2 312 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 HRH3Q9Y5N1 445 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 A0A1W2PP64 1363 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 EDDM13A0A1B0GTR0 161 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 IRAK2O43187 625 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 PRAMEF4O60810 478 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 VAMP5O95183 116 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 ATXN1LP0C7T5 689 aaKnown RBP8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 GABRR1P24046 479 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 NDUFV1P49821 464 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 CLPPQ16740 277 aaPredicted RBP8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 IL1F10Q8WWZ1 152 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 ASB17Q8WXJ9 295 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 TMPRSS4Q9NRS4 437 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 HOXA3O43365 443 aaPredicted RBP8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 MMP15P51511 669 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 GPM6AP51674 278 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 SSX1Q16384 188 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 MICAQ29983 383 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 DOLPP1Q86YN1 238 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 OR2T6Q8NHC8 308 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 TMEM200CA6NKL6 621 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 SLC17A3O00476 420 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 PDGFRLQ15198 375 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 STUMQ69YW2 141 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 VASH2Q86V25 355 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 THOC6Q86W42 341 aaKnown RBP8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 CDC20BQ86Y33 519 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 KLHDC8BQ8IXV7 354 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 SLC46A1Q96NT5 459 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 PIP5K1AQ99755 562 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 GNG12Q9UBI6 72 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 NDRG3Q9UGV2 375 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 MYO5CQ9NQX4 1742 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 CPNE6O95741 557 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 M6PRP20645 277 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 NMBRP28336 390 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 SFT2D1Q8WV19 159 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 ZNF566Q969W8 418 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 P2RX7Q99572 595 aaKnown RBP8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 NXF5Q9H1B4 397 aaKnown RBP8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 MAGIXQ9H6Y5 334 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms