RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 EFR3AQ14156 821 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 SPCS2Q15005 226 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 PCOLCEQ15113 449 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 KLHL22Q53GT1 634 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 ZNF362Q5T0B9 420 aaPredicted RBP13.65□□□□□ -0.22
CCT4-201ENST00000394440 HGDQ93099 445 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 CLEC2DQ9UHP7 191 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 GPN3Q9UHW5 284 aaPredicted RBP13.65□□□□□ -0.22
CCT4-201ENST00000394440 BAIAP2Q9UQB8 552 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 B3GALT1Q9Y5Z6 326 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 ELOA3DA6NLF2 546 aaPredicted RBP13.64□□□□□ -0.23
CCT4-201ENST00000394440 RAB36O95755 333 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 ZNF182P17025 639 aaPredicted RBP13.64□□□□□ -0.23
CCT4-201ENST00000394440 NAGAP17050 411 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 RPS4XP62701 263 aaKnown RBP13.64□□□□□ -0.23
CCT4-201ENST00000394440 EGR4Q05215 589 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 ELOA3BQ3SY89 546 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 RTL4Q6ZR62 310 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 NANOGP1Q8N7R0 232 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 BBS1Q8NFJ9 593 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 ELOA3Q8NG57 546 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 OR5L2Q8NGL0 311 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 LIPHQ8WWY8 451 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 RFKQ969G6 155 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 RNFT2Q96EX2 444 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 IFT27Q9BW83 186 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 LOXL2Q9Y4K0 774 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 IRGMA1A4Y4 181 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 C9J4A7 227 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 PROB1E7EW31 1015 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 LRRN3E7EW58 273 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 CSO75390 466 aaKnown RBP13.64□□□□□ -0.23
CCT4-201ENST00000394440 ARMCX4Q5H9R4 360 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 C3orf38Q5JPI3 329 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 C19orf48Q6RUI8 117 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 LYPD8Q6UX82 237 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 CXXC5Q7LFL8 322 aaKnown RBP13.64□□□□□ -0.23
CCT4-201ENST00000394440 PROKR2Q8NFJ6 384 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 OR5W2Q8NH69 310 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 THAP3Q8WTV1 239 aaPredicted RBP13.64□□□□□ -0.23
CCT4-201ENST00000394440 TAPBPLQ9BX59 468 aa13.64□□□□□ -0.23
CCT4-201ENST00000394440 AKAP7Q9P0M2 348 aaPredicted RBP13.64□□□□□ -0.23
CCT4-201ENST00000394440 WWP2O00308 870 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 SLC22A1O15245 554 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 SCO2O43819 266 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 ZFAND5O76080 213 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 OR7A10O76100 309 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 HTR1FP30939 366 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 SLC6A6P31641 620 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 P2RX1P51575 399 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 RAB15P59190 212 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 INSM1Q01101 510 aaPredicted RBP13.63□□□□□ -0.23
CCT4-201ENST00000394440 ROR2Q01974 943 aaKnown RBP13.63□□□□□ -0.23
CCT4-201ENST00000394440 TOMM34Q15785 309 aaPredicted RBP13.63□□□□□ -0.23
CCT4-201ENST00000394440 CPOQ8IVL8 374 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 LRRC17Q8N6Y2 441 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 GALNT6Q8NCL4 622 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 ELP5Q8TE02 316 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 RPL3LQ92901 407 aaKnown RBP13.63□□□□□ -0.23
CCT4-201ENST00000394440 MGLLQ99685 303 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 ERGIC3Q9Y282 383 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 NDUFB2O95178 105 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 PPP1R3DO95685 299 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 TACR3P29371 465 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 RGS6P49758 472 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 LIMK1P53667 647 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 FBXW4P57775 412 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 MED22Q15528 200 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 CDCP2Q5VXM1 449 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 PAQR6Q6TCH4 344 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 NUP54Q7Z3B4 507 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 MISPQ8IVT2 679 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 SUMF1Q8NBK3 374 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 OR2Y1Q8NGV0 311 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 ZNF563Q8TA94 476 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 OPALINQ96PE5 141 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 EDEM2Q9BV94 578 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 MND1Q9BWT6 205 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 MYOTQ9UBF9 498 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 CHRNA9Q9UGM1 479 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 PTRH2Q9Y3E5 179 aaKnown RBP13.63□□□□□ -0.23
CCT4-201ENST00000394440 ZNF337Q9Y3M9 751 aa13.63□□□□□ -0.23
CCT4-201ENST00000394440 IGHV1-45A0A0A0MS14 117 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 FAM183AA6NL82 134 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 SOCS6O14544 535 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 CDC40O60508 579 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCT4-201ENST00000394440 DKK1O94907 266 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 PEPDP12955 493 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 PGCP20142 388 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 ZNF74Q16587 644 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 SLC35F1Q5T1Q4 408 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 DCAF12Q5T6F0 453 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 NIPAL3Q6P499 406 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 DEPDC7Q96QD5 511 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 HCAR1Q9BXC0 346 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 RACGAP1Q9H0H5 632 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 OSGIN1Q9UJX0 560 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 EXOGQ9Y2C4 368 aaKnown RBP13.62□□□□□ -0.23
CCT4-201ENST00000394440 HS3ST3B1Q9Y662 390 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 A0A1W2PQ72 361 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms