RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 C1QTNF6Q9BXI9 259 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 ZNF350Q9GZX5 532 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 SERINC1Q9NRX5 453 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 ATP23Q9Y6H3 246 aa13.46□□□□□ -0.25
CHMP3-202ENST00000393773 MEGF8Q7Z7M0 2845 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 GPR171O14626 319 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 DNPH1O43598 174 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 KIAA0513O60268 411 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 FCMRO60667 390 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 CYP7B1O75881 506 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 CSTAP01040 98 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 CHRNGP07510 517 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 UBTFL6P0CB48 400 aaPredicted RBP13.45□□□□□ -0.26
CHMP3-202ENST00000393773 PGCP20142 388 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 MAPK1P28482 360 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 PGM1P36871 562 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 NR4A2P43354 598 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 HBA1P69905 142 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 CHRNB3Q05901 458 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 GPR68Q15743 365 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 SWI5Q1ZZU3 235 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 C17orf78Q8N4C9 275 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 KRTCAP2Q8N6L1 136 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 CCDC63Q8NA47 563 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 TMEM234Q8WY98 164 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 COQ8BQ96D53 544 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 ZHX1-C8orf76Q96EF9 292 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 DNAJA3Q96EY1 480 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 PIMREGQ9BSJ6 248 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 C1orf50Q9BV19 199 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 EML4Q9HC35 981 aaKnown RBP13.45□□□□□ -0.26
CHMP3-202ENST00000393773 SLC17A5Q9NRA2 495 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 CTPS2Q9NRF8 586 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 ATAD3AQ9NVI7 634 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 CHRNA9Q9UGM1 479 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 DCTN4Q9UJW0 460 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 AMDHD2Q9Y303 409 aa13.45□□□□□ -0.26
CHMP3-202ENST00000393773 IGHV4-61A0A0C4DH41 118 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 LOC100289279A0A1B0GTE1 492 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 NDUFS8O00217 210 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 AK1P00568 194 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 TFPIP10646 304 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 APOBEC3AP31941 199 aaPredicted RBP13.44□□□□□ -0.26
CHMP3-202ENST00000393773 SOAT1P35610 550 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 APOBEC1P41238 236 aaKnown RBP13.44□□□□□ -0.26
CHMP3-202ENST00000393773 CCT5P48643 541 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 PDLIM4P50479 330 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 MAPK14Q16539 360 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 MST1LQ2TV78 715 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 LSM12Q3MHD2 195 aaKnown RBP13.44□□□□□ -0.26
CHMP3-202ENST00000393773 C9orf135Q5VTT2 229 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 CASP12Q6UXS9 341 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 CCDC103Q8IW40 242 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 RIMKLAQ8IXN7 391 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 ANP32BQ92688 251 aaKnown RBP13.44□□□□□ -0.26
CHMP3-202ENST00000393773 PPP3R2Q96LZ3 170 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 OR11A1Q9GZK7 315 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 FKRPQ9H9S5 495 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 MKLN1Q9UL63 735 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 HDGFL3Q9Y3E1 203 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 SPIN1Q9Y657 262 aaPredicted RBP13.44□□□□□ -0.26
CHMP3-202ENST00000393773 FKBP7Q9Y680 259 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 PMF1-BGLAPU3KQ54 211 aa13.44□□□□□ -0.26
CHMP3-202ENST00000393773 COPEO14579 308 aa13.43□□□□□ -0.26
CHMP3-202ENST00000393773 MRPL33O75394 65 aaKnown RBP13.43□□□□□ -0.26
CHMP3-202ENST00000393773 STX11O75558 287 aa13.43□□□□□ -0.26
CHMP3-202ENST00000393773 LYPLA1O75608 230 aaPredicted RBP13.43□□□□□ -0.26
CHMP3-202ENST00000393773 SHBGP04278 402 aa13.43□□□□□ -0.26
CHMP3-202ENST00000393773 FGF4P08620 206 aa13.43□□□□□ -0.26
CHMP3-202ENST00000393773 BMP4P12644 408 aa13.43□□□□□ -0.26
CHMP3-202ENST00000393773 APEHP13798 732 aaKnown RBP13.43□□□□□ -0.26
CHMP3-202ENST00000393773 H3F3AP84243 136 aa13.43□□□□□ -0.26
CHMP3-202ENST00000393773 FUT5Q11128 374 aa13.43□□□□□ -0.26
CHMP3-202ENST00000393773 ARHGAP11BQ3KRB8 267 aa13.43□□□□□ -0.26
CHMP3-202ENST00000393773 EMBQ6PCB8 327 aa13.43□□□□□ -0.26
CHMP3-202ENST00000393773 EIF3MQ7L2H7 374 aaKnown RBP13.43□□□□□ -0.26
CHMP3-202ENST00000393773 GRINAQ7Z429 371 aa13.43□□□□□ -0.26
CHMP3-202ENST00000393773 NATD1Q8N6N6 113 aa13.43□□□□□ -0.26
CHMP3-202ENST00000393773 MNS1Q8NEH6 495 aa13.43□□□□□ -0.26
CHMP3-202ENST00000393773 SLC35G5Q96KT7 338 aa13.43□□□□□ -0.26
CHMP3-202ENST00000393773 C3orf30Q96M34 536 aa13.43□□□□□ -0.26
CHMP3-202ENST00000393773 SOX7Q9BT81 388 aa13.43□□□□□ -0.26
CHMP3-202ENST00000393773 BHLHE41Q9C0J9 482 aaPredicted RBP13.43□□□□□ -0.26
CHMP3-202ENST00000393773 SLC7A10Q9NS82 523 aa13.43□□□□□ -0.26
CHMP3-202ENST00000393773 MID2Q9UJV3 735 aa13.43□□□□□ -0.26
CHMP3-202ENST00000393773 FLVCR1Q9Y5Y0 555 aa13.43□□□□□ -0.26
CHMP3-202ENST00000393773 RNF103-CHMP3A0A140T963 221 aa13.42□□□□□ -0.26
CHMP3-202ENST00000393773 ANKRD28O15084 1053 aa13.42□□□□□ -0.26
CHMP3-202ENST00000393773 TRIM13O60858 407 aa13.42□□□□□ -0.26
CHMP3-202ENST00000393773 PEX11AO75192 247 aa13.42□□□□□ -0.26
CHMP3-202ENST00000393773 HNF1AP20823 631 aa13.42□□□□□ -0.26
CHMP3-202ENST00000393773 C6orf136Q5SQH8 315 aa13.42□□□□□ -0.26
CHMP3-202ENST00000393773 TYW3Q6IPR3 259 aaKnown RBP13.42□□□□□ -0.26
CHMP3-202ENST00000393773 BHLHB9Q6PI77 547 aa13.42□□□□□ -0.26
CHMP3-202ENST00000393773 GSPT2Q8IYD1 628 aaKnown RBP13.42□□□□□ -0.26
CHMP3-202ENST00000393773 CLECL1Q8IZS7 167 aa13.42□□□□□ -0.26
CHMP3-202ENST00000393773 C4orf33Q8N1A6 199 aa13.42□□□□□ -0.26
CHMP3-202ENST00000393773 CLEC4FQ8N1N0 589 aa13.42□□□□□ -0.26
CHMP3-202ENST00000393773 OIT3Q8WWZ8 545 aa13.42□□□□□ -0.26
CHMP3-202ENST00000393773 C3orf49Q96BT1 292 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms