RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 KLHL38Q2WGJ6 581 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 SFT2D3Q587I9 215 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 PDZK1Q5T2W1 519 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 GDPD3Q7L5L3 318 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 HSD17B13Q7Z5P4 300 aaPredicted RBP4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 ZNF100Q8IYN0 542 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 OR10H4Q8NGA5 316 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 ZPLD1Q8TCW7 415 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 PAQR8Q8TEZ7 354 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 SEC22AQ96IW7 307 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 MAGEB18Q96M61 343 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 GAL3ST1Q99999 423 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 PARD6BQ9BYG5 372 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 SLITRK2Q9H156 845 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 EHD1Q9H4M9 534 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 FN3KRPQ9HA64 309 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 MCCC2Q9HCC0 563 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 SEC14L3Q9UDX4 400 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 Q9UF83 564 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 UBQLN1Q9UMX0 589 aaKnown RBP4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 RABL2BQ9UNT1 228 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 RRP15Q9Y3B9 282 aaKnown RBP4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 IGLV3-10A0A075B6K4 115 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 IGHV1OR15-1A0A075B7D0 117 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 IQANK1A0A1B0GTG1 560 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 A0A1B0GUS0 222 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 A8MXQ7 604 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 IDSB3KWA1 339 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 H0Y8G0 127 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 SNX4O95219 450 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 SEMG1P04279 462 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 HTR1FP30939 366 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 SULT1E1P49888 294 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 DIO3P55073 304 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 RPL23AP62750 156 aaKnown RBP4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 IGLV3-21P80748 117 aaPredicted RBP4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 KYAT1Q16773 422 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 PRR30Q53SZ7 412 aaPredicted RBP4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 PHYHD1Q5SRE7 291 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 HSDL2Q6YN16 418 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 RUFY3Q7L099 469 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 NANOGNBQ7Z5D8 188 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 TMEM179BQ7Z7N9 219 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 ZNF589Q86UQ0 364 aaPredicted RBP4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 FBXO16Q8IX29 292 aaPredicted RBP4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 CXorf40BQ96DE9 158 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 FAM122AQ96E09 287 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 B3GALT6Q96L58 329 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 SLC38A2Q96QD8 506 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 CCNL2Q96S94 520 aaPredicted RBP4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 ZNF184Q99676 751 aaPredicted RBP4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 ZNF670Q9BS34 389 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 GON7Q9BXV9 100 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 TNFRSF19Q9NS68 423 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 HYPKQ9NX55 129 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 ONECUT1Q9UBC0 465 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 ERVW-1Q9UQF0 538 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 ASB3Q9Y575 518 aa4.01□□□□□ -1.77
RNU6-40P-201ENST00000384254 TUBAL3A6NHL2 446 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 TRIM64CA6NLI5 447 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 TIMM8AO60220 97 aaPredicted RBP4□□□□□ -1.77
RNU6-40P-201ENST00000384254 UGT1A9O60656 530 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 FCMRO60667 390 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 CLDN9O95484 217 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 IGHG4P01861 327 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 CAPN1P07384 714 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 CALCRP30988 508 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 CCR1P32246 355 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 UGT1A5P35504 534 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 ATP1B3P54709 279 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 ATP5IP56385 69 aaPredicted RBP4□□□□□ -1.77
RNU6-40P-201ENST00000384254 LRRC74AQ0VAA2 488 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 BOLA3Q53S33 107 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 DMRTC1Q5HYR2 192 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 SAMD4BQ5PRF9 694 aaKnown RBP4□□□□□ -1.77
RNU6-40P-201ENST00000384254 C17orf82Q86X59 251 aaPredicted RBP4□□□□□ -1.77
RNU6-40P-201ENST00000384254 UBE2J2Q8N2K1 259 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 LINC00612Q8N6U2 182 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 NECAB1Q8N987 351 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 FAM83FQ8NEG4 500 aaPredicted RBP4□□□□□ -1.77
RNU6-40P-201ENST00000384254 TRPV1Q8NER1 839 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 OR56B4Q8NH76 319 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 ST8SIA1Q92185 356 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 FBXO32Q969P5 355 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 UBE2E3Q969T4 207 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 TIMD4Q96H15 378 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 TCEANC2Q96MN5 208 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 NICN1Q9BSH3 213 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 TCHPQ9BT92 498 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 RBKSQ9H477 322 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 REEP4Q9H6H4 257 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 ZNF702PQ9H963 129 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 MOKQ9UQ07 419 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 RPL36Q9Y3U8 105 aaKnown RBP4□□□□□ -1.77
RNU6-40P-201ENST00000384254 SMAD5-AS1Q9Y6J3 95 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 TNRQ92752 1358 aa4□□□□□ -1.77
RNU6-40P-201ENST00000384254 COL2A1P02458 1487 aaPredicted RBP3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 TTC21BQ7Z4L5 1316 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 SNTNA6NMZ2 147 aa3.99□□□□□ -1.77
RNU6-40P-201ENST00000384254 ERI2A8K979 691 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms