RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 C11orf71Q6IPW1 123 aa20.33■□□□□ 0.85
U2AF1-202ENST00000380276 CASP12Q6UXS9 341 aa20.33■□□□□ 0.85
U2AF1-202ENST00000380276 B3GLCTQ6Y288 498 aa20.33■□□□□ 0.85
U2AF1-202ENST00000380276 HMGN2P46Q86SG4 172 aa20.33■□□□□ 0.85
U2AF1-202ENST00000380276 OR10H5Q8NGA6 315 aa20.33■□□□□ 0.85
U2AF1-202ENST00000380276 FAM168AQ92567 244 aa20.33■□□□□ 0.85
U2AF1-202ENST00000380276 TAS2R16Q9NYV7 291 aa20.33■□□□□ 0.85
U2AF1-202ENST00000380276 CHRNA9Q9UGM1 479 aa20.33■□□□□ 0.85
U2AF1-202ENST00000380276 ZDHHC2Q9UIJ5 367 aa20.33■□□□□ 0.85
U2AF1-202ENST00000380276 PCDHGB4Q9UN71 923 aa20.33■□□□□ 0.85
U2AF1-202ENST00000380276 WDR45Q9Y484 360 aa20.33■□□□□ 0.85
U2AF1-202ENST00000380276 SLC25A15Q9Y619 301 aa20.33■□□□□ 0.85
U2AF1-202ENST00000380276 IGKV3D-15A0A087WSY6 115 aa20.32■□□□□ 0.84
U2AF1-202ENST00000380276 GPR171O14626 319 aa20.32■□□□□ 0.84
U2AF1-202ENST00000380276 OR12D1P0DN82 309 aa20.32■□□□□ 0.84
U2AF1-202ENST00000380276 APOBEC1P41238 236 aaKnown RBP20.32■□□□□ 0.84
U2AF1-202ENST00000380276 PDK3Q15120 406 aa20.32■□□□□ 0.84
U2AF1-202ENST00000380276 RIMKLAQ8IXN7 391 aa20.32■□□□□ 0.84
U2AF1-202ENST00000380276 OR52E4Q8NGH9 312 aa20.32■□□□□ 0.84
U2AF1-202ENST00000380276 XAGE5Q8WWM1 108 aa20.32■□□□□ 0.84
U2AF1-202ENST00000380276 ARL5BQ96KC2 179 aa20.32■□□□□ 0.84
U2AF1-202ENST00000380276 PPP1R36Q96LQ0 422 aa20.32■□□□□ 0.84
U2AF1-202ENST00000380276 ZNF350Q9GZX5 532 aa20.32■□□□□ 0.84
U2AF1-202ENST00000380276 MKS1Q9NXB0 559 aa20.32■□□□□ 0.84
U2AF1-202ENST00000380276 UPB1Q9UBR1 384 aa20.32■□□□□ 0.84
U2AF1-202ENST00000380276 NUP214P35658 2090 aaPredicted RBP20.31■□□□□ 0.84
U2AF1-202ENST00000380276 CUBNO60494 3623 aa20.31■□□□□ 0.84
U2AF1-202ENST00000380276 GOLGA8QA0A0J9YX86 632 aa20.31■□□□□ 0.84
U2AF1-202ENST00000380276 GOLGA8OA6NCC3 632 aa20.31■□□□□ 0.84
U2AF1-202ENST00000380276 ZNF716A6NP11 495 aa20.31■□□□□ 0.84
U2AF1-202ENST00000380276 GOLGA8NF8WBI6 632 aa20.31■□□□□ 0.84
U2AF1-202ENST00000380276 ANKRD28O15084 1053 aa20.31■□□□□ 0.84
U2AF1-202ENST00000380276 CPSF4O95639 269 aaKnown RBP20.31■□□□□ 0.84
U2AF1-202ENST00000380276 SLC25A16P16260 332 aa20.31■□□□□ 0.84
U2AF1-202ENST00000380276 ZNF16P17020 682 aaPredicted RBP20.31■□□□□ 0.84
U2AF1-202ENST00000380276 MAGEA8P43361 318 aa20.31■□□□□ 0.84
U2AF1-202ENST00000380276 LOXL1Q08397 574 aaPredicted RBP20.31■□□□□ 0.84
U2AF1-202ENST00000380276 MAD2L1Q13257 205 aaPredicted RBP20.31■□□□□ 0.84
U2AF1-202ENST00000380276 MAPK14Q16539 360 aa20.31■□□□□ 0.84
U2AF1-202ENST00000380276 TNFAIP8L2Q6P589 184 aaPredicted RBP20.31■□□□□ 0.84
U2AF1-202ENST00000380276 CCDC103Q8IW40 242 aa20.31■□□□□ 0.84
U2AF1-202ENST00000380276 RAB8BQ92930 207 aa20.31■□□□□ 0.84
U2AF1-202ENST00000380276 OR11A1Q9GZK7 315 aa20.31■□□□□ 0.84
U2AF1-202ENST00000380276 SLC35A3Q9Y2D2 325 aa20.31■□□□□ 0.84
U2AF1-202ENST00000380276 A0A096LNT2 108 aa20.3■□□□□ 0.84
U2AF1-202ENST00000380276 DNAJA2O60884 412 aa20.3■□□□□ 0.84
U2AF1-202ENST00000380276 PMS2P2O95744 297 aa20.3■□□□□ 0.84
U2AF1-202ENST00000380276 BMP4P12644 408 aa20.3■□□□□ 0.84
U2AF1-202ENST00000380276 PGM1P36871 562 aa20.3■□□□□ 0.84
U2AF1-202ENST00000380276 FOXG1P55316 489 aaPredicted RBP20.3■□□□□ 0.84
U2AF1-202ENST00000380276 HPCAP84074 193 aa20.3■□□□□ 0.84
U2AF1-202ENST00000380276 OR7E24Q6IFN5 339 aa20.3■□□□□ 0.84
U2AF1-202ENST00000380276 GRINAQ7Z429 371 aa20.3■□□□□ 0.84
U2AF1-202ENST00000380276 TCP10LQ8TDR4 215 aa20.3■□□□□ 0.84
U2AF1-202ENST00000380276 INPP5KQ9BT40 448 aa20.3■□□□□ 0.84
U2AF1-202ENST00000380276 CCDC106Q9BWC9 280 aa20.3■□□□□ 0.84
U2AF1-202ENST00000380276 FKRPQ9H9S5 495 aa20.3■□□□□ 0.84
U2AF1-202ENST00000380276 NOP53Q9NZM5 478 aaKnown RBP20.3■□□□□ 0.84
U2AF1-202ENST00000380276 HDGFL3Q9Y3E1 203 aa20.3■□□□□ 0.84
U2AF1-202ENST00000380276 KIAA0513O60268 411 aa20.29■□□□□ 0.84
U2AF1-202ENST00000380276 BCAS1O75363 584 aaPredicted RBP20.29■□□□□ 0.84
U2AF1-202ENST00000380276 AGR2O95994 175 aa20.29■□□□□ 0.84
U2AF1-202ENST00000380276 SERPINB5P36952 375 aa20.29■□□□□ 0.84
U2AF1-202ENST00000380276 CLDN8P56748 225 aa20.29■□□□□ 0.84
U2AF1-202ENST00000380276 VLDLRP98155 873 aa20.29■□□□□ 0.84
U2AF1-202ENST00000380276 CHRNB3Q05901 458 aa20.29■□□□□ 0.84
U2AF1-202ENST00000380276 GABRA6Q16445 453 aa20.29■□□□□ 0.84
U2AF1-202ENST00000380276 GPAT3Q53EU6 434 aa20.29■□□□□ 0.84
U2AF1-202ENST00000380276 CYB5R2Q6BCY4 276 aa20.29■□□□□ 0.84
U2AF1-202ENST00000380276 ZNF544Q6NX49 715 aa20.29■□□□□ 0.84
U2AF1-202ENST00000380276 ANKRD46Q86W74 232 aa20.29■□□□□ 0.84
U2AF1-202ENST00000380276 ARFGAP2Q8N6H7 521 aa20.29■□□□□ 0.84
U2AF1-202ENST00000380276 SHARPINQ9H0F6 387 aa20.29■□□□□ 0.84
U2AF1-202ENST00000380276 MALT1Q9UDY8 824 aa20.29■□□□□ 0.84
U2AF1-202ENST00000380276 PMF1-BGLAPU3KQ54 211 aa20.29■□□□□ 0.84
U2AF1-202ENST00000380276 ELOA3DA6NLF2 546 aaPredicted RBP20.28■□□□□ 0.84
U2AF1-202ENST00000380276 ITGA5P08648 1049 aa20.28■□□□□ 0.84
U2AF1-202ENST00000380276 ARRB2P32121 409 aa20.28■□□□□ 0.84
U2AF1-202ENST00000380276 NTF4P34130 210 aa20.28■□□□□ 0.84
U2AF1-202ENST00000380276 PDCD2Q16342 344 aaPredicted RBP20.28■□□□□ 0.84
U2AF1-202ENST00000380276 ELOA3BQ3SY89 546 aa20.28■□□□□ 0.84
U2AF1-202ENST00000380276 TYW3Q6IPR3 259 aaKnown RBP20.28■□□□□ 0.84
U2AF1-202ENST00000380276 LSRQ86X29 649 aaPredicted RBP20.28■□□□□ 0.84
U2AF1-202ENST00000380276 ELOA3Q8NG57 546 aa20.28■□□□□ 0.84
U2AF1-202ENST00000380276 ROPN1LQ96C74 230 aa20.28■□□□□ 0.84
U2AF1-202ENST00000380276 AMBRA1Q9C0C7 1298 aa20.28■□□□□ 0.84
U2AF1-202ENST00000380276 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.28■□□□□ 0.84
U2AF1-202ENST00000380276 LPAR3Q9UBY5 353 aa20.28■□□□□ 0.84
U2AF1-202ENST00000380276 H7C417 338 aa20.27■□□□□ 0.84
U2AF1-202ENST00000380276 RNASET2O00584 256 aaKnown RBP20.27■□□□□ 0.84
U2AF1-202ENST00000380276 DNPH1O43598 174 aa20.27■□□□□ 0.84
U2AF1-202ENST00000380276 LY6HO94772 140 aa20.27■□□□□ 0.84
U2AF1-202ENST00000380276 CHI3L1P36222 383 aaPredicted RBP20.27■□□□□ 0.84
U2AF1-202ENST00000380276 IDH2P48735 452 aaKnown RBP20.27■□□□□ 0.84
U2AF1-202ENST00000380276 KHKP50053 298 aa20.27■□□□□ 0.84
U2AF1-202ENST00000380276 EMX2Q04743 252 aa20.27■□□□□ 0.84
U2AF1-202ENST00000380276 EMBQ6PCB8 327 aa20.27■□□□□ 0.84
U2AF1-202ENST00000380276 KLHL24Q6TFL4 600 aa20.27■□□□□ 0.84
U2AF1-202ENST00000380276 EIF1ADQ8N9N8 165 aaKnown RBP20.27■□□□□ 0.84
U2AF1-202ENST00000380276 C10orf105Q8TEF2 133 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms