RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 AKAP6Q13023 2319 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 DOCK7Q96N67 2140 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 LNP1A1A4G5 178 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 ANKDD1BA6NHY2 528 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 ANXA2P2A6NMY6 339 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 FAM171A2A8MVW0 826 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 LYPD3O95274 346 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 PRPS2P11908 318 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 SPAM1P38567 509 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 ST3GAL3Q11203 375 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 ZNF273Q14593 569 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 ETFDHQ16134 617 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 OR4C11Q6IEV9 310 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 ADAMTSL4Q6UY14 1074 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 PARGQ86W56 976 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 MARCH9Q86YJ5 346 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 GTPBP2Q9BX10 602 aaKnown RBP6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 TSPAN10Q9H1Z9 355 aaPredicted RBP6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 FLRT3Q9NZU0 649 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 HEATR1Q9H583 2144 aaKnown RBP6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 MFSD2BA6NFX1 497 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 HRKO00198 91 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 DCTN6O00399 190 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 NDUFA2O43678 99 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 SELENOFO60613 162 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 SOX30O94993 753 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 RASGRP1O95267 797 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 KRT6AP02538 564 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 KRT6BP04259 564 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 PIPP12273 146 aaPredicted RBP6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 KRT6CP48668 564 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 GUCA2AQ02747 115 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 SCN1BQ07699 218 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 HEPACAMQ14CZ8 416 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 TYW3Q6IPR3 259 aaKnown RBP6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 GRHL2Q6ISB3 625 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 FAM199XQ6PEV8 388 aaPredicted RBP6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 TMPRSS12Q86WS5 348 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 GKN2Q86XP6 184 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 CPOQ8IVL8 374 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 SLC16A11Q8NCK7 471 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 OR1S1Q8NH92 325 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 XAGE5Q8WWM1 108 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 SLC38A1Q9H2H9 487 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 EQTNQ9NQ60 294 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 RABL2AQ9UBK7 228 aaPredicted RBP6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 ATP6V1HQ9UI12 483 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 RPS6KA6Q9UK32 745 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 FAM240BA0A1B0GVZ2 78 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 A0A1W2PRB8 838 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 B8ZZF3 427 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 ORC5O43913 435 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 NDUFS6O75380 124 aaKnown RBP6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 IL1AP01583 271 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 TCRBP04435 133 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 ACP1P24666 158 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 GRPRP30550 384 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 ZNF136P52737 540 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 C1orf94Q6P1W5 598 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 DIO2Q92813 273 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 GIMAP5Q96F15 307 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 TSSK2Q96PF2 358 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 SLC25A18Q9H1K4 315 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 CYSLTR2Q9NS75 346 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 ZDHHC3Q9NYG2 299 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 TEKT2Q9UIF3 430 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 SPATA2Q9UM82 520 aa6.76□□□□□ -1.33
GPCPD1-201ENST00000379019 RIF1Q5UIP0 2472 aaKnown RBP6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 CACNB4O00305 520 aaPredicted RBP6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 PEX12O00623 359 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 CASKO14936 926 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 TPOP07202 933 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 NME1P15531 152 aaKnown RBP6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 AHCYP23526 432 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 MTNR1AP48039 350 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 PDX1P52945 283 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 ZNF763Q0D2J5 394 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 ELOCQ15369 112 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 DDI2Q5TDH0 399 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 RGS7BPQ6MZT1 257 aaPredicted RBP6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 PLET1Q6UQ28 207 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 HSDL2Q6YN16 418 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 CREB3L2Q70SY1 520 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 PARS2Q7L3T8 475 aaKnown RBP6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 FCGR1BQ92637 280 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 OMA1Q96E52 524 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 ZNF354BQ96LW1 612 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 ZFP3Q96NJ6 502 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 SECISBP2Q96T21 854 aaKnown RBP6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 GSDMCQ9BYG8 508 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 PHPT1Q9NRX4 125 aaPredicted RBP6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 SLC5A6Q9Y289 635 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 MRPS7Q9Y2R9 242 aaKnown RBP6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.75□□□□□ -1.336e-11■■■■■ 37.9
GPCPD1-201ENST00000379019 A0A1W2PQU0 124 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 CDX4O14627 284 aaPredicted RBP6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 TIMP2P16035 220 aa6.75□□□□□ -1.33
GPCPD1-201ENST00000379019 PRIM2P49643 509 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms