RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 HTR2CP28335 458 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 ZMAT1Q5H9K5 638 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 LEG1Q6P5S2 330 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 ZNF534Q76KX8 674 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 APIPQ96GX9 242 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 CORINQ9Y5Q5 1042 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 DOT1LQ8TEK3 1739 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 EVX2Q03828 476 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 POU4F3Q15319 338 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 TMEM107Q6UX40 140 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 DPY19L2P2Q6ZN68 376 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 USP51Q70EK9 711 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 MDGA2Q7Z553 956 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 PAQR8Q8TEZ7 354 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 AUTS2Q8WXX7 1259 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 IL26Q9NPH9 171 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 CBLCQ9ULV8 474 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 SLC7A7Q9UM01 511 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 RPS10-NUDT3A0A1W2PQS6 291 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 SYN1P17600 705 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 NAA10P41227 235 aaPredicted RBP9.54□□□□□ -0.88
PTCH1-204ENST00000375290 RPS10P46783 165 aaKnown RBP9.54□□□□□ -0.88
PTCH1-204ENST00000375290 PLCXD2Q0VAA5 305 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 ZNF680Q8NEM1 530 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 IL17RDQ8NFM7 739 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 RBPJLQ9UBG7 517 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 PCDHGA5Q9Y5G8 931 aa9.54□□□□□ -0.88
PTCH1-204ENST00000375290 TCRBV5S1A1TA0A578 114 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 AOAHP28039 575 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 PCSK6P29122 969 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 ARSDP51689 593 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 ERVFC1P60507 584 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 POM121L1PQ3SYA9 428 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 LOC100289279A0A1B0GTE1 492 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 COCHO43405 550 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 KLK8O60259 260 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 PER3P56645 1201 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 PIN1Q13526 163 aaPredicted RBP9.53□□□□□ -0.88
PTCH1-204ENST00000375290 PAN3Q58A45 887 aaKnown RBP9.53□□□□□ -0.88
PTCH1-204ENST00000375290 RNLSQ5VYX0 342 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 CLECL1Q8IZS7 167 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 LSMEM2Q8N112 164 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 SPICQ8N5J4 248 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 YIPF5Q969M3 257 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 SAMD10Q9BYL1 202 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 PLEKHA2Q9HB19 425 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 BEX1Q9HBH7 125 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 SLC25A19Q9HC21 320 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 RAB22AQ9UL26 194 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 PLEKHM1Q9Y4G2 1056 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 FOXD2O60548 495 aaPredicted RBP9.53□□□□□ -0.88
PTCH1-204ENST00000375290 MT-ATP6P00846 226 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 THBS1P07996 1170 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 SNCAP37840 140 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 RPL34P49207 117 aaKnown RBP9.53□□□□□ -0.88
PTCH1-204ENST00000375290 MGAT3Q09327 533 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 FAHD1Q6P587 224 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 STPG2Q8N412 459 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 SLC22A24Q8N4F4 322 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 WDR76Q9H967 626 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 PNO1Q9NRX1 252 aaKnown RBP9.53□□□□□ -0.88
PTCH1-204ENST00000375290 PPT2Q9UMR5 302 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 TUBGCP6Q96RT7 1819 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 LOC105369274A0A096LPK9 316 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 GRXCR1A8MXD5 290 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 PAPLNO95428 1278 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 GRM7Q14831 915 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 SGCBQ16585 318 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 EML3Q32P44 896 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 COL13A1Q5TAT6 717 aaPredicted RBP9.53□□□□□ -0.88
PTCH1-204ENST00000375290 TEX261Q6UWH6 196 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 CCDC190Q86UF4 302 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 OR4N4Q8N0Y3 316 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 WDR92Q96MX6 357 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 U3KQ87 197 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 PLGP00747 810 aaPredicted RBP9.53□□□□□ -0.88
PTCH1-204ENST00000375290 ELAVL4P26378 380 aaKnown RBP9.53□□□□□ -0.88
PTCH1-204ENST00000375290 SNTB1Q13884 538 aaKnown RBP9.53□□□□□ -0.88
PTCH1-204ENST00000375290 CTU2Q2VPK5 515 aaKnown RBP9.53□□□□□ -0.88
PTCH1-204ENST00000375290 SPRYD7Q5W111 196 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 BPIFB2Q8N4F0 458 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 OR1J1Q8NGS3 322 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 OIT3Q8WWZ8 545 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 C16orf70Q9BSU1 422 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 RNF208Q9H0X6 261 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 ZNF442Q9H7R0 627 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 RABGGTBP53611 331 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 UBE2KP61086 200 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 STACQ99469 402 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 LYRM2Q9NU23 88 aaPredicted RBP9.53□□□□□ -0.88
PTCH1-204ENST00000375290 PLEKHJ1Q9NW61 149 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 LRP5O75197 1615 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 SOX15O60248 233 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 MBP02144 154 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 SOX18P35713 384 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 ADGRG3Q86Y34 549 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 OR51L1Q8NGJ5 315 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 TRAV1-2A0A0B4J238 106 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 AIPO00170 330 aa9.53□□□□□ -0.88
PTCH1-204ENST00000375290 ZNF254O75437 659 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms