RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 IP6K3Q96PC2 410 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 ZNF226Q9NYT6 803 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 IL20Q9NYY1 176 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 TVP23BQ9NYZ1 205 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 CDH10Q9Y6N8 788 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 CEP250Q9BV73 2442 aa17.69■□□□□ 0.42
CHTOP-204ENST00000368694 WBP4O75554 376 aaKnown RBP17.69■□□□□ 0.42
CHTOP-204ENST00000368694 LIFP15018 202 aa17.69■□□□□ 0.42
CHTOP-204ENST00000368694 CXCR1P25024 350 aa17.69■□□□□ 0.42
CHTOP-204ENST00000368694 PTGDSP41222 190 aa17.69■□□□□ 0.42
CHTOP-204ENST00000368694 CDK5Q00535 292 aa17.69■□□□□ 0.42
CHTOP-204ENST00000368694 C12orf73Q69YU5 71 aa17.69■□□□□ 0.42
CHTOP-204ENST00000368694 CCDC103Q8IW40 242 aa17.69■□□□□ 0.42
CHTOP-204ENST00000368694 RHOXF1Q8NHV9 184 aa17.69■□□□□ 0.42
CHTOP-204ENST00000368694 APH1BQ8WW43 257 aa17.69■□□□□ 0.42
CHTOP-204ENST00000368694 TSSK6Q9BXA6 273 aa17.69■□□□□ 0.42
CHTOP-204ENST00000368694 ADAM19Q9H013 955 aa17.69■□□□□ 0.42
CHTOP-204ENST00000368694 CPAMD8Q8IZJ3 1885 aa17.69■□□□□ 0.42
CHTOP-204ENST00000368694 DOCK10Q96BY6 2186 aa17.69■□□□□ 0.42
CHTOP-204ENST00000368694 TRAV27A0A087WT01 109 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 ANKUB1A6NFN9 424 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 MPZL2O60487 215 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 SUMO3P55854 103 aaPredicted RBP17.68■□□□□ 0.42
CHTOP-204ENST00000368694 DCTN2Q13561 401 aaKnown RBP17.68■□□□□ 0.42
CHTOP-204ENST00000368694 DCAF10Q5QP82 559 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 H3F3CQ6NXT2 135 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 OAFQ86UD1 273 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 SGTBQ96EQ0 304 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 SAMD8Q96LT4 415 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 IL4I1Q96RQ9 567 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 SLC19A3Q9BZV2 496 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 OR52D1Q9H346 318 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 C12orf10Q9HB07 376 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 ANKRD10Q9NXR5 420 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 OSGIN1Q9UJX0 560 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 IGKV1D-42A0A075B6H8 117 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 PTGES3LE9PB15 166 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 TRMUO75648 421 aaKnown RBP17.68■□□□□ 0.42
CHTOP-204ENST00000368694 CCDC159P0C7I6 412 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 HLCSP50747 726 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 ACER2Q5QJU3 275 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 ACSM5Q6NUN0 579 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 SLC30A6Q6NXT4 461 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 VASH2Q86V25 355 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 CLDN22Q8N7P3 220 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 OR52L1Q8NGH7 329 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 OR51A7Q8NH64 312 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 TMEM234Q8WY98 164 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 ZNF566Q969W8 418 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 TMEM43Q9BTV4 400 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 SLC25A19Q9HC21 320 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 SCN3BQ9NY72 215 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 VDAC3Q9Y277 283 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 CEPT1Q9Y6K0 416 aa17.68■□□□□ 0.42
CHTOP-204ENST00000368694 PTPRZ1P23471 2315 aaPredicted RBP17.67■□□□□ 0.42
CHTOP-204ENST00000368694 A0A087WXM4 84 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 B4DXG7 233 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 FAM20BO75063 409 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 SLC25A12O75746 678 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 DXOO77932 396 aaKnown RBP17.67■□□□□ 0.42
CHTOP-204ENST00000368694 BMP7P18075 431 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 ITGA3P26006 1051 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 POLR2HP52434 150 aaKnown RBP17.67■□□□□ 0.42
CHTOP-204ENST00000368694 SNTA1Q13424 505 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 GRINAQ7Z429 371 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 TCEANCQ8N8B7 351 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 SECISBP2Q96T21 854 aaKnown RBP17.67■□□□□ 0.42
CHTOP-204ENST00000368694 TEX12Q9BXU0 123 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 LRRN3E7EW58 273 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 HCN1O60741 890 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 RCBTB2O95199 551 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 CH25HO95992 272 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 CCL3P10147 92 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 GABRB1P18505 474 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 MSX1P28360 303 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 ZNF41P51814 821 aaPredicted RBP17.67■□□□□ 0.42
CHTOP-204ENST00000368694 CXCR4P61073 352 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 ZNF468Q5VIY5 522 aaPredicted RBP17.67■□□□□ 0.42
CHTOP-204ENST00000368694 SLC22A10Q63ZE4 541 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 RPL13AP3Q6NVV1 102 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 JMJD6Q6NYC1 403 aaPredicted RBP17.67■□□□□ 0.42
CHTOP-204ENST00000368694 CYP4Z2PQ8N1L4 340 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 C10orf53Q8N6V4 93 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 CLEC1AQ8NC01 280 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 OR2T33Q8NG76 320 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 FER1L6-AS2Q96M78 137 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 PRRG3Q9BZD7 231 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 RSL24D1Q9UHA3 163 aaKnown RBP17.67■□□□□ 0.42
CHTOP-204ENST00000368694 SIGLEC7Q9Y286 467 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 TPRKBQ9Y3C4 175 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 HRH3Q9Y5N1 445 aa17.67■□□□□ 0.42
CHTOP-204ENST00000368694 TRIM64A6NGJ6 449 aa17.66■□□□□ 0.42
CHTOP-204ENST00000368694 IMPDH2P12268 514 aa17.66■□□□□ 0.42
CHTOP-204ENST00000368694 PCSK6P29122 969 aa17.66■□□□□ 0.42
CHTOP-204ENST00000368694 GABARAPL2P60520 117 aa17.66■□□□□ 0.42
CHTOP-204ENST00000368694 AIMP2Q13155 320 aaKnown RBP17.66■□□□□ 0.42
CHTOP-204ENST00000368694 INPP5JQ15735 1006 aaPredicted RBP17.66■□□□□ 0.42
CHTOP-204ENST00000368694 SNAPC1Q16533 368 aa17.66■□□□□ 0.42
CHTOP-204ENST00000368694 RSPO4Q2I0M5 234 aaPredicted RBP17.66■□□□□ 0.42
CHTOP-204ENST00000368694 SMARCD3Q6STE5 483 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms