RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 TMEM106CQ9BVX2 250 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 SFXN1Q9H9B4 322 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 IMPA2O14732 288 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 CHP2O43745 196 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 RPP14O95059 124 aaKnown RBP11.38□□□□□ -0.59
PTPN7-202ENST00000367279 ATF1P18846 271 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 SLC6A6P31641 620 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 CCR4P51679 360 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 GBX2P52951 348 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-202ENST00000367279 CLDN12P56749 244 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 BDH1Q02338 343 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 CEP78Q5JTW2 689 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 LAMTOR1Q6IAA8 161 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 UBE2Q1Q7Z7E8 422 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 HMGB4Q8WW32 186 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 FGF14Q92915 247 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 CLIP3Q96DZ5 547 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 SIPA1Q96FS4 1042 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 GTPBP2Q9BX10 602 aaKnown RBP11.38□□□□□ -0.59
PTPN7-202ENST00000367279 CHIAQ9BZP6 476 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 OR51J1Q9H342 316 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 CDCP1Q9H5V8 836 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 AUNIPQ9H7T9 357 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 CEP290O15078 2479 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 PLRG1O43660 514 aaKnown RBP11.38□□□□□ -0.59
PTPN7-202ENST00000367279 PLPP2O43688 288 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 GPR75O95800 540 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 HIST1H1CP16403 213 aaKnown RBP11.38□□□□□ -0.59
PTPN7-202ENST00000367279 CXCL3P19876 107 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 TAS2R43P59537 309 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 TFF2Q03403 129 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 ERV3-1Q14264 604 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 TMEM196Q5HYL7 178 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 FCRL6Q6DN72 434 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 DGAT2L6Q6ZPD8 337 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 RTL4Q6ZR62 310 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 ZNF655Q8N720 491 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-202ENST00000367279 HRASLS2Q9NWW9 162 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 FLRT3Q9NZU0 649 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 RWDD3Q9Y3V2 267 aa11.38□□□□□ -0.59
PTPN7-202ENST00000367279 TDRD6O60522 2096 aaKnown RBP11.37□□□□□ -0.59
PTPN7-202ENST00000367279 ACOD1A6NK06 481 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 TNFRSF10AO00220 468 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 KLF8O95600 359 aaPredicted RBP11.37□□□□□ -0.59
PTPN7-202ENST00000367279 PGDP52209 483 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 PPP1CAP62136 330 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 TNK1Q13470 666 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 PLA1AQ53H76 456 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 RNF44Q7L0R7 432 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 PARGQ86W56 976 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 ELMOD2Q8IZ81 293 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 OR11H7Q8NGC8 314 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 WDR92Q96MX6 357 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 GDE1Q9NZC3 331 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 REV3LO60673 3130 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 IDSB3KWA1 339 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 SELENOFO60613 162 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 PEPDP12955 493 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 NRG3P56975 720 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 SNTB2Q13425 540 aaKnown RBP11.37□□□□□ -0.59
PTPN7-202ENST00000367279 RPL13AP3Q6NVV1 102 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 CSNK1A1LQ8N752 337 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 OR9A4Q8NGU2 314 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 NT5CQ8TCD5 201 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 LGALS14Q8TCE9 139 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 KCTD12Q96CX2 325 aaKnown RBP11.37□□□□□ -0.59
PTPN7-202ENST00000367279 AHCYL2Q96HN2 611 aaKnown RBP11.37□□□□□ -0.59
PTPN7-202ENST00000367279 HSPA12BQ96MM6 686 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 DERL3Q96Q80 235 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 NMNAT3Q96T66 252 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 SARGQ9BW04 601 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 LMAN2LQ9H0V9 348 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 HCN3Q9P1Z3 774 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 C2orf16Q68DN1 1984 aa11.37□□□□□ -0.59
PTPN7-202ENST00000367279 MUC22E2RYF6 1773 aaPredicted RBP11.36□□□□□ -0.59
PTPN7-202ENST00000367279 ANKRD61A6NGH8 418 aa11.36□□□□□ -0.59
PTPN7-202ENST00000367279 KCNJ13O60928 360 aa11.36□□□□□ -0.59
PTPN7-202ENST00000367279 ADAM11O75078 769 aa11.36□□□□□ -0.59
PTPN7-202ENST00000367279 NGFRP08138 427 aa11.36□□□□□ -0.59
PTPN7-202ENST00000367279 COL9A1P20849 921 aa11.36□□□□□ -0.59
PTPN7-202ENST00000367279 NTSR1P30989 418 aa11.36□□□□□ -0.59
PTPN7-202ENST00000367279 OR3A3P47888 321 aa11.36□□□□□ -0.59
PTPN7-202ENST00000367279 KIR2DS3Q14952 304 aa11.36□□□□□ -0.59
PTPN7-202ENST00000367279 ZNHIT3Q15649 155 aaPredicted RBP11.36□□□□□ -0.59
PTPN7-202ENST00000367279 TMPRSS11FQ6ZWK6 438 aa11.36□□□□□ -0.59
PTPN7-202ENST00000367279 TPRA1Q86W33 373 aa11.36□□□□□ -0.59
PTPN7-202ENST00000367279 C7orf61Q8IZ16 206 aa11.36□□□□□ -0.59
PTPN7-202ENST00000367279 PIAS4Q8N2W9 510 aaPredicted RBP11.36□□□□□ -0.59
PTPN7-202ENST00000367279 METTL27Q8N6F8 245 aaPredicted RBP11.36□□□□□ -0.59
PTPN7-202ENST00000367279 GIMAP1Q8WWP7 306 aa11.36□□□□□ -0.59
PTPN7-202ENST00000367279 HERVK_113Q902F9 699 aa11.36□□□□□ -0.59
PTPN7-202ENST00000367279 HSD17B8Q92506 261 aa11.36□□□□□ -0.59
PTPN7-202ENST00000367279 CNN2Q99439 309 aaKnown RBP11.36□□□□□ -0.59
PTPN7-202ENST00000367279 DPCDQ9BVM2 203 aaPredicted RBP11.36□□□□□ -0.59
PTPN7-202ENST00000367279 EIF3KQ9UBQ5 218 aaKnown RBP11.36□□□□□ -0.59
PTPN7-202ENST00000367279 OR10H1Q9Y4A9 318 aa11.36□□□□□ -0.59
PTPN7-202ENST00000367279 MCIDASD6RGH6 385 aa11.36□□□□□ -0.59
PTPN7-202ENST00000367279 TFP02787 698 aa11.36□□□□□ -0.59
PTPN7-202ENST00000367279 FCER2P06734 321 aa11.36□□□□□ -0.59
PTPN7-202ENST00000367279 H2AFB2P0C5Z0 115 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms