RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 PTP4A1Q93096 173 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 KISS1RQ969F8 398 aaPredicted RBP6.33□□□□□ -1.4
TRIM55-203ENST00000350034 BORCS5Q969J3 196 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 CLIP3Q96DZ5 547 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 OMA1Q96E52 524 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 ZHX1-C8orf76Q96EF9 292 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 SH3YL1Q96HL8 342 aaPredicted RBP6.33□□□□□ -1.4
TRIM55-203ENST00000350034 PLEKHA8Q96JA3 519 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 LRFN5Q96NI6 719 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 TNFRSF13CQ96RJ3 184 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 GPX7Q96SL4 187 aaPredicted RBP6.33□□□□□ -1.4
TRIM55-203ENST00000350034 ADOQ96SZ5 270 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 DDOQ99489 341 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 SPSB2Q99619 263 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 KLHDC3Q9BQ90 382 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 WDR77Q9BQA1 342 aaPredicted RBP6.33□□□□□ -1.4
TRIM55-203ENST00000350034 RTN4RQ9BZR6 473 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 OR51E2Q9H255 320 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 DCSTAMPQ9H295 470 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 PALMDQ9NP74 551 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 AKIP1Q9NQ31 210 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 FBXO8Q9NRD0 319 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 NDUFB11Q9NX14 153 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 HAO2Q9NYQ3 351 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 CCDC59Q9P031 241 aaKnown RBP6.33□□□□□ -1.4
TRIM55-203ENST00000350034 RPS6KB2Q9UBS0 482 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 COPS7AQ9UBW8 275 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 SEC14L4Q9UDX3 406 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 CHRNA9Q9UGM1 479 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 SF3B6Q9Y3B4 125 aaKnown RBP6.33□□□□□ -1.4
TRIM55-203ENST00000350034 PCDHGB2Q9Y5G2 931 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 VPS13AQ96RL7 3174 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 DMDP11532 3685 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 NUP210LQ5VU65 1888 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 CACNA1EQ15878 2313 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 TRAV27A0A087WT01 109 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 OR6C70A6NIJ9 312 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 IDSB3KWA1 339 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 SOCS6O14544 535 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 MYL12BO14950 172 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 ARPC3O15145 178 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 IDH3BO43837 385 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 NDUFB2O95178 105 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 NADKO95544 446 aaPredicted RBP6.32□□□□□ -1.4
TRIM55-203ENST00000350034 PPP1R3DO95685 299 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 TSPAN19P0C672 248 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 SP9P0CG40 484 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 HSMCR30P0CW71 290 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 GAAP10253 952 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 SAGP10523 405 aaPredicted RBP6.32□□□□□ -1.4
TRIM55-203ENST00000350034 APEHP13798 732 aaKnown RBP6.32□□□□□ -1.4
TRIM55-203ENST00000350034 NAGAP17050 411 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 MYL12AP19105 171 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 HK1P19367 917 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 ABCD3P28288 659 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 TGFBR1P36897 503 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 OPRL1P41146 370 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 SLC1A3P43003 542 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 CRYBB2P43320 205 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 SERPINB10P48595 397 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 EMP2P54851 167 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 DLX5P56178 289 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 WNT4P56705 351 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 COPZ1P61923 177 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 RNF4P78317 190 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 DAB2P98082 770 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 CRYZQ08257 329 aaKnown RBP6.32□□□□□ -1.4
TRIM55-203ENST00000350034 PLCXD2Q0VAA5 305 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 ITGADQ13349 1161 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 C1DQ13901 141 aaKnown RBP6.32□□□□□ -1.4
TRIM55-203ENST00000350034 ZNF74Q16587 644 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 SOWAHCQ53LP3 525 aaPredicted RBP6.32□□□□□ -1.4
TRIM55-203ENST00000350034 DESI1Q6ICB0 168 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 LCN10Q6JVE6 187 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 MRPL14Q6P1L8 145 aaKnown RBP6.32□□□□□ -1.4
TRIM55-203ENST00000350034 PLBD1Q6P4A8 553 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 ARHGAP11AQ6P4F7 1023 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 DPY19L2P2Q6ZN68 376 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 OAFQ86UD1 273 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 PPP1R3BQ86XI6 285 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 PRR22Q8IZ63 422 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 MFSD4AQ8N468 514 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 GATSQ8NAP1 163 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 PSD4Q8NDX1 1056 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 OR52N1Q8NH53 320 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 OR51A7Q8NH64 312 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 RNF217Q8TC41 542 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 PHOSPHO1Q8TCT1 267 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 TM9SF4Q92544 642 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 DTNBP1Q96EV8 351 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 LOXL4Q96JB6 756 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 GAL3ST4Q96RP7 486 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 GFM1Q96RP9 751 aaKnown RBP6.32□□□□□ -1.4
TRIM55-203ENST00000350034 TIMP4Q99727 224 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 SH3GL3Q99963 347 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 CHCHD6Q9BRQ6 235 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 ARHGAP9Q9BRR9 750 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 CENPOQ9BU64 300 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 IFT27Q9BW83 186 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 CDADC1Q9BWV3 514 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms