RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 ABHD17BQ5VST6 288 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 BROXQ5VW32 411 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 ACSM5Q6NUN0 579 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 SLC27A4Q6P1M0 643 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 RTL4Q6ZR62 310 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 GRINAQ7Z429 371 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 OAFQ86UD1 273 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 C10orf53Q8N6V4 93 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 TSPAN14Q8NG11 270 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 OR4K17Q8NGC6 315 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 RHOXF1Q8NHV9 184 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 FANK1Q8TC84 345 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 NXPE2Q96DL1 559 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 TMEM43Q9BTV4 400 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 ANGPTL4Q9BY76 406 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 YTHDF1Q9BYJ9 559 aaKnown RBP13.35□□□□□ -0.27
CBX3-201ENST00000337620 SLC19A3Q9BZV2 496 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 SH2D2AQ9NP31 389 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 EML6Q6ZMW3 1958 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 DCHS1Q96JQ0 3298 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 TRAV27A0A087WT01 109 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 TMED7-TICAM2A0A0A6YYA0 188 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 SLC25A12O75746 678 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 SPINK2P20155 84 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 EEF1B2P24534 225 aaKnown RBP13.34□□□□□ -0.27
CBX3-201ENST00000337620 CYB561P49447 251 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 ZNF41P51814 821 aaPredicted RBP13.34□□□□□ -0.27
CBX3-201ENST00000337620 CDH15P55291 814 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 EGR4Q05215 589 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 SMN1Q16637 294 aaKnown RBP13.34□□□□□ -0.27
CBX3-201ENST00000337620 KCTD21Q4G0X4 260 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 TMEM81Q6P7N7 255 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 WDSUB1Q8N9V3 476 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 ST8SIA1Q92185 356 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 IL4I1Q96RQ9 567 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 OR52D1Q9H346 318 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 RYDENQ9NUL5 291 aaKnown RBP13.34□□□□□ -0.27
CBX3-201ENST00000337620 FBXL2Q9UKC9 423 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 TMED7Q9Y3B3 224 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 IGLV3-32A0A0A0MS00 114 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 A6NL46 340 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 SLC1A7O00341 560 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 XPNPEP2O43895 674 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 WBP4O75554 376 aaKnown RBP13.34□□□□□ -0.27
CBX3-201ENST00000337620 RCBTB2O95199 551 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 P04436 131 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 PRKCAP17252 672 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 BMP7P18075 431 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 SDHBP21912 280 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 TCEA1P23193 301 aaKnown RBP13.34□□□□□ -0.27
CBX3-201ENST00000337620 HTR3AP46098 478 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 MASP1P48740 699 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 HLCSP50747 726 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 TBC1D25Q3MII6 688 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 C12orf73Q69YU5 71 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 ADGRG3Q86Y34 549 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 CCDC103Q8IW40 242 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 LRRC17Q8N6Y2 441 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 OR2M3Q8NG83 312 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 APH1BQ8WW43 257 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 KTI12Q96EK9 354 aaPredicted RBP13.34□□□□□ -0.27
CBX3-201ENST00000337620 DNAJA3Q96EY1 480 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 JSRP1Q96MG2 331 aaPredicted RBP13.34□□□□□ -0.27
CBX3-201ENST00000337620 TNFRSF13CQ96RJ3 184 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 NPAS1Q99742 590 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 PROK2Q9HC23 129 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 MED17Q9NVC6 651 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 SIGLEC7Q9Y286 467 aa13.34□□□□□ -0.27
CBX3-201ENST00000337620 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 PTGES3LE9PB15 166 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 SUSD5O60279 629 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 HCN1O60741 890 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 SMIM18P0DKX4 95 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 CRHBPP24387 322 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 FXYD6P3P58550 94 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 CLN3Q13286 438 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 TOP3AQ13472 1001 aaPredicted RBP13.33□□□□□ -0.28
CBX3-201ENST00000337620 ZBED5Q49AG3 693 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 SMARCD3Q6STE5 483 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 LINC00696Q6ZRV3 163 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 PLCZ1Q86YW0 608 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 GALNT16Q8N428 558 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 CLDN22Q8N7P3 220 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 TCEANCQ8N8B7 351 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 OR52L1Q8NGH7 329 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 THAP4Q8WY91 577 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 RELTQ969Z4 430 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 FRMD6Q96NE9 622 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 ENKD1Q9H0I2 346 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 PTGES2Q9H7Z7 377 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 SLC25A19Q9HC21 320 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 HHATLQ9HCP6 504 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 ABI3Q9P2A4 366 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 AKAP13Q12802 2813 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 TMEM72A0PK05 275 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 SHISA8B8ZZ34 492 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 MPZL2O60487 215 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 PTP4A3O75365 173 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 OR7A10O76100 309 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 GABRB1P18505 474 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms