RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 LYPD4Q6UWN0 246 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 PRSS42Q7Z5A4 293 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 ZPLD1Q8TCW7 415 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 SLC46A1Q96NT5 459 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 ZNF649Q9BS31 505 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 ZNF426Q9BUY5 554 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 NUAK2Q9H093 628 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 FBXO8Q9NRD0 319 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 ABCB10Q9NRK6 738 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 MRPS18AQ9NVS2 196 aaKnown RBP10.43□□□□□ -0.74
SCG2-201ENST00000305409 ERVK13-1Q9NX77 482 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 GALNT8Q9NY28 637 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 ZNF346Q9UL40 294 aaKnown RBP10.43□□□□□ -0.74
SCG2-201ENST00000305409 IGKV1D-42A0A075B6H8 117 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 IGHV5-10-1A0A0J9YXX1 117 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 FAM86C2PA6NEL3 165 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 RGS5O15539 181 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 LAMTOR5O43504 91 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 HCRTR2O43614 444 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 SCO2O43819 266 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 HCN1O60741 890 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 SOX30O94993 753 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 IL33O95760 270 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 NUDT14O95848 222 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 PAICSP22234 425 aaKnown RBP10.42□□□□□ -0.74
SCG2-201ENST00000305409 CTBP2P56545 445 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 ERVK-25P63136 954 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 TIMM50Q3ZCQ8 353 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 PHF19Q5T6S3 580 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 DCDC5Q6ZRR9 648 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 MEPCEQ7L2J0 689 aaKnown RBP10.42□□□□□ -0.74
SCG2-201ENST00000305409 KANSL1Q7Z3B3 1105 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 MAML2Q8IZL2 1156 aaPredicted RBP10.42□□□□□ -0.74
SCG2-201ENST00000305409 RFLNBQ8N5W9 214 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 FAM98AQ8NCA5 519 aaKnown RBP10.42□□□□□ -0.74
SCG2-201ENST00000305409 FAM83FQ8NEG4 500 aaPredicted RBP10.42□□□□□ -0.74
SCG2-201ENST00000305409 OR7G1Q8NGA0 311 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 MOSPD2Q8NHP6 518 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 B4GALNT2Q8NHY0 566 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 ZNF563Q8TA94 476 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 ZNRF4Q8WWF5 429 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 EDAQ92838 391 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 PMM1Q92871 262 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 ZMYND19Q96E35 227 aaPredicted RBP10.42□□□□□ -0.74
SCG2-201ENST00000305409 SGTBQ96EQ0 304 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 MVB12AQ96EY5 273 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 ZNF578Q96N58 590 aaPredicted RBP10.42□□□□□ -0.74
SCG2-201ENST00000305409 MOGAT1Q96PD6 335 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 GTPBP2Q9BX10 602 aaKnown RBP10.42□□□□□ -0.74
SCG2-201ENST00000305409 MKKSQ9NPJ1 570 aaPredicted RBP10.42□□□□□ -0.74
SCG2-201ENST00000305409 CMC2Q9NRP2 79 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 TXNL4BQ9NX01 149 aaKnown RBP10.42□□□□□ -0.74
SCG2-201ENST00000305409 STUB1Q9UNE7 303 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 SSR3Q9UNL2 185 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 TTC28Q96AY4 2481 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 CACNA1CQ13936 2221 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 A0A087WUJ7 227 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 TBX1O43435 398 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 IL12BP29460 328 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 FABP5Q01469 135 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 PLCXD2Q0VAA5 305 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 SKP2Q13309 424 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 C1QL3Q5VWW1 255 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 LINC00114Q6XXX2 140 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 CLDN22Q8N7P3 220 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 KISS1RQ969F8 398 aaPredicted RBP10.42□□□□□ -0.74
SCG2-201ENST00000305409 C8orf44Q96CB5 159 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 RASD2Q96D21 266 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 CCDC74BQ96LY2 380 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 TEAD3Q99594 435 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 WDR12Q9GZL7 423 aaKnown RBP10.42□□□□□ -0.74
SCG2-201ENST00000305409 MMP27Q9H306 513 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 OCIAD1Q9NX40 245 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 SEC14L4Q9UDX3 406 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 TMEM5Q9Y2B1 443 aa10.42□□□□□ -0.74
SCG2-201ENST00000305409 EXOSC1Q9Y3B2 195 aaKnown RBP10.42□□□□□ -0.74
SCG2-201ENST00000305409 SIRT4Q9Y6E7 314 aaPredicted RBP10.42□□□□□ -0.74
SCG2-201ENST00000305409 CD8B2A6NJW9 211 aa10.41□□□□□ -0.74
SCG2-201ENST00000305409 ELOA3DA6NLF2 546 aaPredicted RBP10.41□□□□□ -0.74
SCG2-201ENST00000305409 RIIAD1A6NNX1 92 aa10.41□□□□□ -0.74
SCG2-201ENST00000305409 EFCAB7A8K855 629 aa10.41□□□□□ -0.74
SCG2-201ENST00000305409 ZNF354AO60765 605 aaPredicted RBP10.41□□□□□ -0.74
SCG2-201ENST00000305409 SCRG1O75711 98 aa10.41□□□□□ -0.74
SCG2-201ENST00000305409 CD8BP10966 210 aa10.41□□□□□ -0.74
SCG2-201ENST00000305409 CPEP16870 476 aa10.41□□□□□ -0.74
SCG2-201ENST00000305409 SDC2P34741 201 aa10.41□□□□□ -0.74
SCG2-201ENST00000305409 ELOA3BQ3SY89 546 aa10.41□□□□□ -0.74
SCG2-201ENST00000305409 FNDC7Q5VTL7 733 aa10.41□□□□□ -0.74
SCG2-201ENST00000305409 RPTNQ6XPR3 784 aa10.41□□□□□ -0.74
SCG2-201ENST00000305409 Q6ZNX1 250 aa10.41□□□□□ -0.74
SCG2-201ENST00000305409 RTL4Q6ZR62 310 aa10.41□□□□□ -0.74
SCG2-201ENST00000305409 ZNF485Q8NCK3 441 aa10.41□□□□□ -0.74
SCG2-201ENST00000305409 ELOA3Q8NG57 546 aa10.41□□□□□ -0.74
SCG2-201ENST00000305409 NMNAT3Q96T66 252 aa10.41□□□□□ -0.74
SCG2-201ENST00000305409 ARHGAP9Q9BRR9 750 aa10.41□□□□□ -0.74
SCG2-201ENST00000305409 PELOQ9BRX2 385 aaKnown RBP10.41□□□□□ -0.74
SCG2-201ENST00000305409 WWTR1Q9GZV5 400 aa10.41□□□□□ -0.74
SCG2-201ENST00000305409 MED17Q9NVC6 651 aa10.41□□□□□ -0.74
SCG2-201ENST00000305409 SEMA5BQ9P283 1151 aa10.41□□□□□ -0.74
SCG2-201ENST00000305409 DAPK2Q9UIK4 370 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms