RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 FAR1Q8WVX9 515 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 DNAJA4Q8WW22 397 aaPredicted RBP8.55□□□□□ -1.04
RFX3-201ENST00000302303 TMEM234Q8WY98 164 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 ADGRG7Q96K78 797 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 ARL5BQ96KC2 179 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 ZNF347Q96SE7 839 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 GPA33Q99795 319 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 SLX1AQ9BQ83 275 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 PTDSS2Q9BVG9 487 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 OR11A1Q9GZK7 315 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 ASF1BQ9NVP2 202 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 DNAJB9Q9UBS3 223 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 TMED7Q9Y3B3 224 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 MAGED1Q9Y5V3 778 aaPredicted RBP8.55□□□□□ -1.04
RFX3-201ENST00000302303 ZNF407Q9C0G0 2248 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 NPIPA5E9PKD4 350 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 SUSD5O60279 629 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 OPN1LWP04000 364 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 H1F0P07305 194 aaKnown RBP8.54□□□□□ -1.04
RFX3-201ENST00000302303 ITGA2P17301 1181 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 HOXB6P17509 224 aaKnown RBP8.54□□□□□ -1.04
RFX3-201ENST00000302303 BMP7P18075 431 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 PTNP21246 168 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 CHMP24386 653 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 EIF1P41567 113 aaKnown RBP8.54□□□□□ -1.04
RFX3-201ENST00000302303 ZNF41P51814 821 aaPredicted RBP8.54□□□□□ -1.04
RFX3-201ENST00000302303 CLDN18P56856 261 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 CLDN20P56880 219 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 COPZ1P61923 177 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 HSF1Q00613 529 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 ALDH6A1Q02252 535 aaKnown RBP8.54□□□□□ -1.04
RFX3-201ENST00000302303 CRYZQ08257 329 aaKnown RBP8.54□□□□□ -1.04
RFX3-201ENST00000302303 FHL1Q13642 323 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 LAPTM4AQ15012 233 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 PODNL1Q6PEZ8 512 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 FAM98AQ8NCA5 519 aaKnown RBP8.54□□□□□ -1.04
RFX3-201ENST00000302303 OR52J3Q8NH60 311 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 OR14L1PQ8NHC6 308 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 NR4A3Q92570 626 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 FNDC11Q9BVV2 318 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 ANKRD19PQ9H560 264 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 C20orf141Q9NUB4 165 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 TNFRSF10DQ9UBN6 386 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 B4GALT7Q9UBV7 327 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 CHRNA9Q9UGM1 479 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 DKKL1Q9UK85 242 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 NPIPA1Q9UND3 350 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 U3KQV3 271 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 CFAP46Q8IYW2 2715 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 TRGV5A0A0B4J1U4 118 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 A0A0J9YW62 118 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 SH3PXD2BA1X283 911 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 FTCDNL1E5RQL4 147 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 ACOT7O00154 380 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 TFECO14948 347 aaPredicted RBP8.54□□□□□ -1.04
RFX3-201ENST00000302303 ZNF208O43345 1280 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 KLF4O43474 513 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 PIP5K1CO60331 668 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 HCN1O60741 890 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 GADD45GO95257 159 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 IMPDH2P12268 514 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 PEPDP12955 493 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 ZNF708P17019 499 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 CCNA2P20248 432 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 FASP25445 335 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 ELK4P28324 431 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 HTR3AP46098 478 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 OMPP47874 163 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 RAC1P63000 192 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 FOXD4Q12950 439 aaPredicted RBP8.54□□□□□ -1.04
RFX3-201ENST00000302303 RIPK1Q13546 671 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 TRAM2Q15035 370 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 TOMM20Q15388 145 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 EXOC3L2Q2M3D2 409 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 EMC4Q5J8M3 183 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 RAET1LQ5VY80 246 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 POMZP3Q6PJE2 187 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 PRICKLE2Q7Z3G6 844 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 ZER1Q7Z7L7 766 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 MEX3DQ86XN8 651 aaKnown RBP8.54□□□□□ -1.04
RFX3-201ENST00000302303 EPHX4Q8IUS5 362 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 PQLC1Q8N2U9 271 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 LSM14AQ8ND56 463 aaKnown RBP8.54□□□□□ -1.04
RFX3-201ENST00000302303 PFN4Q8NHR9 129 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 ACOT11Q8WXI4 607 aaPredicted RBP8.54□□□□□ -1.04
RFX3-201ENST00000302303 TAAR8Q969N4 342 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 RELTQ969Z4 430 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 KTI12Q96EK9 354 aaPredicted RBP8.54□□□□□ -1.04
RFX3-201ENST00000302303 WDYHV1Q96HA8 205 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 MPP4Q96JB8 637 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 GPR137Q96N19 417 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 ALPK1Q96QP1 1244 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 TIMP4Q99727 224 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 PIGQQ9BRB3 760 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 TMEM43Q9BTV4 400 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 TMEM185BQ9H7F4 350 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 COQ10BQ9H8M1 238 aa8.54□□□□□ -1.04
RFX3-201ENST00000302303 FAM32AQ9Y421 112 aaKnown RBP8.54□□□□□ -1.04
RFX3-201ENST00000302303 A0A1B0GTH9 108 aa8.53□□□□□ -1.04
RFX3-201ENST00000302303 LRRN3E7EW58 273 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms