RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 NMNAT3Q96T66 252 aa13.37□□□□□ -0.27
SMG8-201ENST00000300917 TEAD3Q99594 435 aa13.37□□□□□ -0.27
SMG8-201ENST00000300917 ARHGAP9Q9BRR9 750 aa13.37□□□□□ -0.27
SMG8-201ENST00000300917 MKKSQ9NPJ1 570 aaPredicted RBP13.37□□□□□ -0.27
SMG8-201ENST00000300917 TIGARQ9NQ88 270 aa13.37□□□□□ -0.27
SMG8-201ENST00000300917 COMMD3Q9UBI1 195 aa13.37□□□□□ -0.27
SMG8-201ENST00000300917 SERTAD3Q9UJW9 196 aa13.37□□□□□ -0.27
SMG8-201ENST00000300917 MED12Q93074 2177 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 TMEM131Q92545 1883 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 ZNF670-ZNF695F2Z2N8 137 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 H0YIG0 161 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 HCRTR2O43614 444 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 UTS2O95399 124 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 TIAF1O95411 115 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 F13BP05160 661 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 ZNF362Q5T0B9 420 aaPredicted RBP13.36□□□□□ -0.27
SMG8-201ENST00000300917 HLA-DQA1Q5Y7H0 255 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 MARCH3Q86UD3 253 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 LNX2Q8N448 690 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 SLC38A9Q8NBW4 561 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 TOR1AIP2Q8NFQ8 470 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 OR6K6Q8NGW6 343 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 ELOA3DA6NLF2 546 aaPredicted RBP13.36□□□□□ -0.27
SMG8-201ENST00000300917 PATE3B3GLJ2 98 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 H7C1C5 153 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 SCDO00767 359 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 RORCP51449 518 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 LCN6P62502 163 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 SERTAD2Q14140 314 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 SHBQ15464 509 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 TOMM34Q15785 309 aaPredicted RBP13.36□□□□□ -0.27
SMG8-201ENST00000300917 ELOA3BQ3SY89 546 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 ZNF550Q7Z398 422 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 ACBD7Q8N6N7 88 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 ZSCAN1Q8NBB4 408 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 ELOA3Q8NG57 546 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 MOSPD2Q8NHP6 518 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 ZNRF4Q8WWF5 429 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 TSSK2Q96PF2 358 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 CTRCQ99895 268 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 VN1R1Q9GZP7 353 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 PALMDQ9NP74 551 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 C14orf105Q9NVL8 296 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 CCDC59Q9P031 241 aaKnown RBP13.36□□□□□ -0.27
SMG8-201ENST00000300917 PRODH2Q9UF12 536 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 GMEB2Q9UKD1 530 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 PEX16Q9Y5Y5 336 aa13.36□□□□□ -0.27
SMG8-201ENST00000300917 TMEM129A0AVI4 362 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 NPIPB9F8W1W9 429 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 MSL3P1P0C860 447 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 LYSMD4Q5XG99 296 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 SSX6Q7RTT6 188 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 LYSMD2Q8IV50 215 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 DNASE2BQ8WZ79 361 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 ATOH1Q92858 354 aaPredicted RBP13.35□□□□□ -0.27
SMG8-201ENST00000300917 C3orf49Q96BT1 292 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 SGTBQ96EQ0 304 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 KCTD7Q96MP8 289 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 SHISA3A0PJX4 238 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 DYRK3O43781 588 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 UPK1BO75841 260 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 SPNP16150 400 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 AQP2P41181 271 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 OR12D2P58182 307 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 OXA1LQ15070 435 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 ZNF141Q15928 474 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 ZNF322Q6U7Q0 402 aaPredicted RBP13.35□□□□□ -0.27
SMG8-201ENST00000300917 RTL4Q6ZR62 310 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 SPATC1Q76KD6 591 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 DEFB123Q8N688 67 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 GUCD1Q96NT3 240 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 MOGAT1Q96PD6 335 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 UCK1Q9HA47 277 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 CMC2Q9NRP2 79 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 EPHA6Q9UF33 1036 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 TMEM5Q9Y2B1 443 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 PCDHGB6Q9Y5F9 930 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 H3BSH0 61 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 POLR1CO15160 346 aaPredicted RBP13.35□□□□□ -0.27
SMG8-201ENST00000300917 FMO6PO60774 539 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 PTP4A3O75365 173 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 UBL4AP11441 157 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 ZNF3P17036 446 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 IL12BP29460 328 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 RORAP35398 523 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 BCAP31P51572 246 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 PLK5Q496M5 336 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 TP53I3Q53FA7 332 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 ZNF574Q6ZN55 896 aaPredicted RBP13.35□□□□□ -0.27
SMG8-201ENST00000300917 C7orf57Q8NEG2 295 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 OR13C5Q8NGS8 318 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 OR6C1Q96RD1 312 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 POLE3Q9NRF9 147 aa13.35□□□□□ -0.27
SMG8-201ENST00000300917 DDAH2O95865 285 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 E2F1Q01094 437 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 C1QL3Q5VWW1 255 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.34□□□□□ -0.27
SMG8-201ENST00000300917 C9orf40Q8IXQ3 194 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 CLDN22Q8N7P3 220 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 KISS1RQ969F8 398 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms