RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 GPR52Q9Y2T5 361 aa20.82■□□□□ 0.92
PTX3-201ENST00000295927 LRRN3E7EW58 273 aa20.81■□□□□ 0.92
PTX3-201ENST00000295927 FADS2O95864 444 aaKnown RBP20.81■□□□□ 0.92
PTX3-201ENST00000295927 STSP08842 583 aa20.81■□□□□ 0.92
PTX3-201ENST00000295927 GP1BBP13224 206 aa20.81■□□□□ 0.92
PTX3-201ENST00000295927 F8A1P23610 371 aa20.81■□□□□ 0.92
PTX3-201ENST00000295927 C21orf33P30042 268 aaPredicted RBP20.81■□□□□ 0.92
PTX3-201ENST00000295927 SOX3P41225 446 aa20.81■□□□□ 0.92
PTX3-201ENST00000295927 SLC15A1P46059 708 aa20.81■□□□□ 0.92
PTX3-201ENST00000295927 MEDAGQ5VYS4 303 aa20.81■□□□□ 0.92
PTX3-201ENST00000295927 OR5M10Q6IEU7 315 aa20.81■□□□□ 0.92
PTX3-201ENST00000295927 SVOPQ8N4V2 548 aa20.81■□□□□ 0.92
PTX3-201ENST00000295927 MUL1Q969V5 352 aa20.81■□□□□ 0.92
PTX3-201ENST00000295927 EFCAB10A6NFE3 127 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 BHLHE40O14503 412 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 HMGN1P05114 100 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 TTKP33981 857 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 DLSTP36957 453 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 ST13P50502 369 aaKnown RBP20.8■□□□□ 0.92
PTX3-201ENST00000295927 ST3GAL4Q11206 333 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 QPRTQ15274 297 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 CNPY1Q3B7I2 92 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 ZNF791Q3KP31 576 aaPredicted RBP20.8■□□□□ 0.92
PTX3-201ENST00000295927 FCRLBQ6BAA4 426 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 CCDC81Q6ZN84 652 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 STX19Q8N4C7 294 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 LRRC17Q8N6Y2 441 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 ZNF582Q96NG8 517 aaPredicted RBP20.8■□□□□ 0.92
PTX3-201ENST00000295927 MCCC2Q9HCC0 563 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 CNOT2Q9NZN8 540 aaKnown RBP20.8■□□□□ 0.92
PTX3-201ENST00000295927 KLRF1Q9NZS2 232 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 OSGIN1Q9UJX0 560 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 MAN1A2O60476 641 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 CDC40O60508 579 aaKnown RBP eCLIP20.8■□□□□ 0.92
PTX3-201ENST00000295927 EGR4Q05215 589 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 SLC46A3Q7Z3Q1 461 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 MARCH9Q86YJ5 346 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 CYP4Z2PQ8N1L4 340 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 OR13F1Q8NGS4 319 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 PLEKHA8Q96JA3 519 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 GPR87Q9BY21 358 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 ACOT13Q9NPJ3 140 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 MED17Q9NVC6 651 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 TAS2R10Q9NYW0 307 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 FBXL4Q9UKA2 621 aa20.8■□□□□ 0.92
PTX3-201ENST00000295927 PCSK5Q92824 1860 aa20.79■□□□□ 0.92
PTX3-201ENST00000295927 HTR3EA5X5Y0 456 aa20.79■□□□□ 0.92
PTX3-201ENST00000295927 B4DXG7 233 aa20.79■□□□□ 0.92
PTX3-201ENST00000295927 C21orf140B9A014 251 aa20.79■□□□□ 0.92
PTX3-201ENST00000295927 TERTO14746 1132 aaKnown RBP20.79■□□□□ 0.92
PTX3-201ENST00000295927 RAD1O60671 282 aa20.79■□□□□ 0.92
PTX3-201ENST00000295927 SEC14L2O76054 403 aa20.79■□□□□ 0.92
PTX3-201ENST00000295927 OR7A10O76100 309 aa20.79■□□□□ 0.92
PTX3-201ENST00000295927 INMTO95050 263 aa20.79■□□□□ 0.92
PTX3-201ENST00000295927 SLC2A10O95528 541 aa20.79■□□□□ 0.92
PTX3-201ENST00000295927 IGF2P01344 180 aa20.79■□□□□ 0.92
PTX3-201ENST00000295927 GRK5P34947 590 aa20.79■□□□□ 0.92
PTX3-201ENST00000295927 PTGDSP41222 190 aa20.79■□□□□ 0.92
PTX3-201ENST00000295927 LNX2Q8N448 690 aa20.79■□□□□ 0.92
PTX3-201ENST00000295927 IFT27Q9BW83 186 aa20.79■□□□□ 0.92
PTX3-201ENST00000295927 CDCP1Q9H5V8 836 aa20.79■□□□□ 0.92
PTX3-201ENST00000295927 METTL7AQ9H8H3 244 aa20.79■□□□□ 0.92
PTX3-201ENST00000295927 YARS2Q9Y2Z4 477 aaKnown RBP20.79■□□□□ 0.92
PTX3-201ENST00000295927 RPL36Q9Y3U8 105 aaKnown RBP20.79■□□□□ 0.92
PTX3-201ENST00000295927 ZNF99A8MXY4 864 aaPredicted RBP20.78■□□□□ 0.92
PTX3-201ENST00000295927 WISP1O95388 367 aa20.78■□□□□ 0.92
PTX3-201ENST00000295927 HPP00738 406 aa20.78■□□□□ 0.92
PTX3-201ENST00000295927 DBTP11182 482 aaKnown RBP20.78■□□□□ 0.92
PTX3-201ENST00000295927 PIPP12273 146 aaPredicted RBP20.78■□□□□ 0.92
PTX3-201ENST00000295927 CCNA2P20248 432 aa20.78■□□□□ 0.92
PTX3-201ENST00000295927 CXCR1P25024 350 aa20.78■□□□□ 0.92
PTX3-201ENST00000295927 SLC9A3P48764 834 aa20.78■□□□□ 0.92
PTX3-201ENST00000295927 ZNF91Q05481 1191 aa20.78■□□□□ 0.92
PTX3-201ENST00000295927 POMZP3Q6PJE2 187 aa20.78■□□□□ 0.92
PTX3-201ENST00000295927 RTL4Q6ZR62 310 aa20.78■□□□□ 0.92
PTX3-201ENST00000295927 CLVS1Q8IUQ0 354 aaPredicted RBP20.78■□□□□ 0.92
PTX3-201ENST00000295927 CPAMD8Q8IZJ3 1885 aa20.78■□□□□ 0.92
PTX3-201ENST00000295927 ANKUB1A6NFN9 424 aa20.78■□□□□ 0.92
PTX3-201ENST00000295927 ICAM2P13598 275 aa20.78■□□□□ 0.92
PTX3-201ENST00000295927 OPN5Q6U736 354 aa20.78■□□□□ 0.92
PTX3-201ENST00000295927 RPS19BP1Q86WX3 136 aaKnown RBP20.78■□□□□ 0.92
PTX3-201ENST00000295927 ANKK1Q8NFD2 765 aa20.78■□□□□ 0.92
PTX3-201ENST00000295927 RORBQ92753 470 aa20.78■□□□□ 0.92
PTX3-201ENST00000295927 NACC2Q96BF6 587 aa20.78■□□□□ 0.92
PTX3-201ENST00000295927 B3GNT4Q9C0J1 378 aa20.78■□□□□ 0.92
PTX3-201ENST00000295927 P4HTMQ9NXG6 502 aa20.78■□□□□ 0.92
PTX3-201ENST00000295927 MED11Q9P086 117 aa20.78■□□□□ 0.92
PTX3-201ENST00000295927 ZNF337Q9Y3M9 751 aa20.78■□□□□ 0.92
PTX3-201ENST00000295927 MUC6Q6W4X9 2439 aa20.77■□□□□ 0.92
PTX3-201ENST00000295927 EML6Q6ZMW3 1958 aa20.77■□□□□ 0.92
PTX3-201ENST00000295927 LOC101059948A0A1B0GTJ6 334 aa20.77■□□□□ 0.92
PTX3-201ENST00000295927 KDM4EB2RXH2 506 aaPredicted RBP20.77■□□□□ 0.92
PTX3-201ENST00000295927 STMND1H3BQB6 276 aa20.77■□□□□ 0.92
PTX3-201ENST00000295927 SLC6A6P31641 620 aa20.77■□□□□ 0.92
PTX3-201ENST00000295927 CASP3P42574 277 aa20.77■□□□□ 0.92
PTX3-201ENST00000295927 POLR2HP52434 150 aaKnown RBP20.77■□□□□ 0.92
PTX3-201ENST00000295927 GP2P55259 537 aaKnown RBP20.77■□□□□ 0.92
PTX3-201ENST00000295927 Q0VFX4 171 aa20.77■□□□□ 0.92
PTX3-201ENST00000295927 IL10RAQ13651 578 aa20.77■□□□□ 0.92
PTX3-201ENST00000295927 TUBA3CQ13748 450 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms