RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 PLCZ1Q86YW0 608 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 PMM1Q92871 262 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 SCARF2Q96GP6 870 aaPredicted RBP15.1■□□□□ 0.01
CTCF-201ENST00000264010 GON7Q9BXV9 100 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 PLA2G12AQ9BZM1 189 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 RNF121Q9H920 327 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 DRD5P21918 477 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 GMFBP60983 142 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 ARHGAP11AQ6P4F7 1023 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 GPALPP1Q8IXQ4 340 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 SPRYD4Q8WW59 207 aaPredicted RBP15.1■□□□□ 0.01
CTCF-201ENST00000264010 ZDHHC12Q96GR4 267 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 GAL3ST4Q96RP7 486 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 UBQLN3Q9H347 655 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 CDCP1Q9H5V8 836 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 SCPEP1Q9HB40 452 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 TRIM3O75382 744 aaPredicted RBP15.09■□□□□ 0.01
CTCF-201ENST00000264010 REM1O75628 298 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 NPR2P20594 1047 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 HTR1FP30939 366 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 GBX2P52951 348 aaPredicted RBP15.09■□□□□ 0.01
CTCF-201ENST00000264010 SLC3A1Q07837 685 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 PON3Q15166 354 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 TCTE1Q5JU00 501 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 GDPD3Q7L5L3 318 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 MORN4Q8NDC4 146 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 SIMC1Q8NDZ2 872 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 PTCHD1Q96NR3 888 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 FGF20Q9NP95 211 aaPredicted RBP15.09■□□□□ 0.01
CTCF-201ENST00000264010 C4orf51C9J302 202 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 GABRA5P31644 462 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 FCRL6Q6DN72 434 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 MEPCEQ7L2J0 689 aaKnown RBP15.09■□□□□ 0.01
CTCF-201ENST00000264010 FAM220AQ7Z4H9 259 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 LNX2Q8N448 690 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 FAM174AQ8TBP5 190 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 RSC1A1Q92681 617 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 ZNF416Q9BWM5 594 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 DSPPQ9NZW4 1301 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 LOC100509620A0A075B734 347 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 CD8B2A6NJW9 211 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 SCDO00767 359 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 CD8BP10966 210 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 RPS25P62851 125 aaKnown RBP15.09■□□□□ 0.01
CTCF-201ENST00000264010 ACTC1P68032 377 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 ACTA1P68133 377 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 DLX2Q07687 328 aaPredicted RBP15.09■□□□□ 0.01
CTCF-201ENST00000264010 CA13Q8N1Q1 262 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 PFDN5Q99471 154 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 ALG8Q9BVK2 526 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 LMAN1LQ9HAT1 526 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 USP36Q9P275 1121 aaKnown RBP15.09■□□□□ 0.01
CTCF-201ENST00000264010 GRIP1Q9Y3R0 1128 aa15.09■□□□□ 0.01
CTCF-201ENST00000264010 TNFSF14O43557 240 aa15.08■□□□□ 0.01
CTCF-201ENST00000264010 SERPINA3P01011 423 aa15.08■□□□□ 0.01
CTCF-201ENST00000264010 GRK5P34947 590 aa15.08■□□□□ 0.01
CTCF-201ENST00000264010 BIKQ13323 160 aa15.08■□□□□ 0.01
CTCF-201ENST00000264010 CLDN22Q8N7P3 220 aa15.08■□□□□ 0.01
CTCF-201ENST00000264010 OR6K6Q8NGW6 343 aa15.08■□□□□ 0.01
CTCF-201ENST00000264010 PHOSPHO1Q8TCT1 267 aa15.08■□□□□ 0.01
CTCF-201ENST00000264010 HYLS1Q96M11 299 aa15.08■□□□□ 0.01
CTCF-201ENST00000264010 COMMD9Q9P000 198 aa15.08■□□□□ 0.01
CTCF-201ENST00000264010 PEX12O00623 359 aa15.08■□□□□ 0
CTCF-201ENST00000264010 CDK2AP1O14519 115 aa15.08■□□□□ 0
CTCF-201ENST00000264010 LCN1P31025 176 aa15.08■□□□□ 0
CTCF-201ENST00000264010 TRHRP34981 398 aaPredicted RBP15.08■□□□□ 0
CTCF-201ENST00000264010 GRM7Q14831 915 aa15.08■□□□□ 0
CTCF-201ENST00000264010 SSX1Q16384 188 aa15.08■□□□□ 0
CTCF-201ENST00000264010 NDUFAF6Q330K2 333 aa15.08■□□□□ 0
CTCF-201ENST00000264010 ZNF595Q8IYB9 648 aa15.08■□□□□ 0
CTCF-201ENST00000264010 SLC44A3Q8N4M1 653 aa15.08■□□□□ 0
CTCF-201ENST00000264010 ARL6Q9H0F7 186 aa15.08■□□□□ 0
CTCF-201ENST00000264010 ZNF768Q9H5H4 540 aaKnown RBP15.08■□□□□ 0
CTCF-201ENST00000264010 ZNF576Q9H609 170 aa15.08■□□□□ 0
CTCF-201ENST00000264010 ATP13A2Q9NQ11 1180 aa15.08■□□□□ 0
CTCF-201ENST00000264010 IFT46Q9NQC8 304 aa15.08■□□□□ 0
CTCF-201ENST00000264010 CYB5R1Q9UHQ9 305 aa15.08■□□□□ 0
CTCF-201ENST00000264010 CKAP5Q14008 2032 aa15.08■□□□□ 0
CTCF-201ENST00000264010 GXYLT2A0PJZ3 443 aa15.08■□□□□ 0
CTCF-201ENST00000264010 BLACEA4D250 179 aa15.08■□□□□ 0
CTCF-201ENST00000264010 SLC25A12O75746 678 aa15.08■□□□□ 0
CTCF-201ENST00000264010 PPP1R3DO95685 299 aa15.08■□□□□ 0
CTCF-201ENST00000264010 ST6GAL1P15907 406 aa15.08■□□□□ 0
CTCF-201ENST00000264010 CPEP16870 476 aa15.08■□□□□ 0
CTCF-201ENST00000264010 SERTAD2Q14140 314 aa15.08■□□□□ 0
CTCF-201ENST00000264010 GFOD2Q3B7J2 385 aa15.08■□□□□ 0
CTCF-201ENST00000264010 ZNF440Q8IYI8 595 aa15.08■□□□□ 0
CTCF-201ENST00000264010 OR13C2Q8NGS9 318 aa15.08■□□□□ 0
CTCF-201ENST00000264010 C2CD4CQ8TF44 421 aa15.08■□□□□ 0
CTCF-201ENST00000264010 TCTN2Q96GX1 697 aa15.08■□□□□ 0
CTCF-201ENST00000264010 SPACA7Q96KW9 195 aa15.08■□□□□ 0
CTCF-201ENST00000264010 WFDC6Q9BQY6 131 aa15.08■□□□□ 0
CTCF-201ENST00000264010 AICDAQ9GZX7 198 aa15.08■□□□□ 0
CTCF-201ENST00000264010 SLITRK2Q9H156 845 aa15.08■□□□□ 0
CTCF-201ENST00000264010 ABCG5Q9H222 651 aa15.08■□□□□ 0
CTCF-201ENST00000264010 CD93Q9NPY3 652 aa15.08■□□□□ 0
CTCF-201ENST00000264010 NIT2Q9NQR4 276 aa15.08■□□□□ 0
CTCF-201ENST00000264010 RGS9O75916 674 aaPredicted RBP15.07■□□□□ 0
CTCF-201ENST00000264010 OR6A2O95222 327 aa15.07■□□□□ 0
CTCF-201ENST00000264010 TRAM1Q15629 374 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms