RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 CLPTM1O96005 669 aa20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 ATP6V1B1P15313 513 aa20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 POLR2HP52434 150 aaKnown RBP20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 SNRPGP62308 76 aaKnown RBP20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 TUBA4AP68366 448 aa20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 RPL13AP3Q6NVV1 102 aa20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 PTCHD4Q6ZW05 846 aa20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 TRUB1Q8WWH5 349 aaKnown RBP20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 TMEM234Q8WY98 164 aa20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 SAMD8Q96LT4 415 aa20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 ANGPTL4Q9BY76 406 aa20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 PCNX3Q9H6A9 2034 aa20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 A0A087WXM4 84 aa20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 ETV2O00321 342 aaPredicted RBP20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 XPNPEP2O43895 674 aa20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 RCBTB2O95199 551 aa20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 CCL3P10147 92 aa20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 EFNB1P98172 346 aa20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 FHL1Q13642 323 aa20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 CLEC12AQ5QGZ9 265 aa20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 SLC46A3Q7Z3Q1 461 aa20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 OR4Q3Q8NH05 313 aa20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 POLDIP3Q9BY77 421 aaKnown RBP20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 HCN1O60741 890 aa20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 OR7A10O76100 309 aa20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 PRKCAP17252 672 aa20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 CXCR1P25024 350 aa20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 HTR3AP46098 478 aa20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 CSNK2BP67870 215 aa20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 AIMP2Q13155 320 aaKnown RBP20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 PRAMEF20Q5VT98 475 aa20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 RTL4Q6ZR62 310 aa20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 OAFQ86UD1 273 aa20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 FADS6Q8N9I5 356 aa20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 OR2M3Q8NG83 312 aa20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 OR8J1Q8NGP2 316 aa20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 SGCZQ96LD1 299 aa20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 FER1L6-AS2Q96M78 137 aa20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 PROK2Q9HC23 129 aa20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 PLCXD1Q9NUJ7 323 aa20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 PAK1IP1Q9NWT1 392 aaPredicted RBP20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 TVP23BQ9NYZ1 205 aa20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 CNOT1A5YKK6 2376 aaKnown RBP20.79■□□□□ 0.92
SMARCB1-201ENST00000263121 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 TMED7-TICAM2A0A0A6YYA0 188 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 TFAP2AP05549 437 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 SLC9A3P48764 834 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 PCYT1AP49585 367 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 RSPO4Q2I0M5 234 aaPredicted RBP20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 PGGHGQ32M88 737 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 ZBED5Q49AG3 693 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 TMEM201Q5SNT2 666 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 SLC22A10Q63ZE4 541 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 SMARCD3Q6STE5 483 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 ARSKQ6UWY0 536 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 ADGRG3Q86Y34 549 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 GPALPP1Q8IXQ4 340 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 WDSUB1Q8N9V3 476 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 OR2T33Q8NG76 320 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 LIPHQ8WWY8 451 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 SGCDQ92629 289 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 FGF11Q92914 225 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 IL4I1Q96RQ9 567 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 ENKD1Q9H0I2 346 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 UBQLN3Q9H347 655 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 TMED7Q9Y3B3 224 aa20.78■□□□□ 0.92
SMARCB1-201ENST00000263121 TRAV27A0A087WT01 109 aa20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 ANKRD33BA6NCL7 494 aa20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 PRKYO43930 277 aa20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 CH25HO95992 272 aa20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 EEF1B2P24534 225 aaKnown RBP20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 INPP5JQ15735 1006 aaPredicted RBP20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 ZNF74Q16587 644 aa20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 ZNF773Q6PK81 442 aa20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 THSD4Q6ZMP0 1018 aa20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 VASH2Q86V25 355 aa20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 BEST3Q8N1M1 668 aa20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 TCEANCQ8N8B7 351 aa20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 OR52L1Q8NGH7 329 aa20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 OR51A7Q8NH64 312 aa20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 TNFRSF13CQ96RJ3 184 aa20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 DUSP21Q9H596 190 aa20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 MCCC2Q9HCC0 563 aa20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 MED17Q9NVC6 651 aa20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 SCN3BQ9NY72 215 aa20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 IL20RAQ9UHF4 553 aa20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 TPRKBQ9Y3C4 175 aa20.77■□□□□ 0.92
SMARCB1-201ENST00000263121 CPAMD8Q8IZJ3 1885 aa20.77■□□□□ 0.91
SMARCB1-201ENST00000263121 DPPA5A6NC42 116 aa20.77■□□□□ 0.91
SMARCB1-201ENST00000263121 A6NHS1 94 aa20.77■□□□□ 0.91
SMARCB1-201ENST00000263121 LRRN3E7EW58 273 aa20.77■□□□□ 0.91
SMARCB1-201ENST00000263121 FAM20BO75063 409 aa20.77■□□□□ 0.91
SMARCB1-201ENST00000263121 HTR1AP08908 422 aa20.77■□□□□ 0.91
SMARCB1-201ENST00000263121 BMP7P18075 431 aa20.77■□□□□ 0.91
SMARCB1-201ENST00000263121 SLC35A2P78381 396 aa20.77■□□□□ 0.91
SMARCB1-201ENST00000263121 SLC25A53Q5H9E4 307 aa20.77■□□□□ 0.91
SMARCB1-201ENST00000263121 CYP4Z2PQ8N1L4 340 aa20.77■□□□□ 0.91
SMARCB1-201ENST00000263121 SLC43A2Q8N370 569 aa20.77■□□□□ 0.91
SMARCB1-201ENST00000263121 LRRC17Q8N6Y2 441 aa20.77■□□□□ 0.91
SMARCB1-201ENST00000263121 PRRG3Q9BZD7 231 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms