RNA–Protein interactions for RNA: ENST00000262803.9

UPF1-201, Transcript of UPF1, RNA helicase and ATPase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF1, Length 5,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-201ENST00000262803 MAN2C1Q9NTJ4 1040 aa17.87■□□□□ 0.45
UPF1-201ENST00000262803 TEX10Q9NXF1 929 aaPredicted RBP17.87■□□□□ 0.45
UPF1-201ENST00000262803 USP36Q9P275 1121 aaKnown RBP17.87■□□□□ 0.45
UPF1-201ENST00000262803 GPR171O14626 319 aa17.87■□□□□ 0.45
UPF1-201ENST00000262803 WNT11O96014 354 aa17.87■□□□□ 0.45
UPF1-201ENST00000262803 SLC5A2P31639 672 aa17.87■□□□□ 0.45
UPF1-201ENST00000262803 HBA1P69905 142 aa17.87■□□□□ 0.45
UPF1-201ENST00000262803 HOXC5Q00444 222 aa17.87■□□□□ 0.45
UPF1-201ENST00000262803 TBCEQ15813 527 aaPredicted RBP17.87■□□□□ 0.45
UPF1-201ENST00000262803 MAVSQ7Z434 540 aa17.87■□□□□ 0.45
UPF1-201ENST00000262803 EGFL6Q8IUX8 553 aa17.87■□□□□ 0.45
UPF1-201ENST00000262803 PGBD5Q8N414 524 aa17.87■□□□□ 0.45
UPF1-201ENST00000262803 OR2T35Q8NGX2 323 aa17.87■□□□□ 0.45
UPF1-201ENST00000262803 ARL11Q969Q4 196 aa17.87■□□□□ 0.45
UPF1-201ENST00000262803 MS4A4AQ96JQ5 239 aa17.87■□□□□ 0.45
UPF1-201ENST00000262803 SGCZQ96LD1 299 aa17.87■□□□□ 0.45
UPF1-201ENST00000262803 UHRF1Q96T88 793 aaPredicted RBP17.87■□□□□ 0.45
UPF1-201ENST00000262803 SLC19A3Q9BZV2 496 aa17.87■□□□□ 0.45
UPF1-201ENST00000262803 CXCL16Q9H2A7 254 aa17.87■□□□□ 0.45
UPF1-201ENST00000262803 A0A1B0GVG6 124 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 OTOL1A6NHN0 477 aaPredicted RBP17.86■□□□□ 0.45
UPF1-201ENST00000262803 SURF4O15260 269 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 ZNF264O43296 627 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 CLDN2P57739 230 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 SMN1Q16637 294 aaKnown RBP17.86■□□□□ 0.45
UPF1-201ENST00000262803 TMEM52BQ4KMG9 183 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 LMF1Q96S06 567 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 GMPR2Q9P2T1 348 aaKnown RBP17.86■□□□□ 0.45
UPF1-201ENST00000262803 HCFC2Q9Y5Z7 792 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 H0YIV9 168 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 SOCS7O14512 581 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 HEXAP06865 529 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 EEF1A2Q05639 463 aaKnown RBP17.86■□□□□ 0.45
UPF1-201ENST00000262803 STK11Q15831 433 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 EXT1Q16394 746 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 SLC36A2Q495M3 483 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 SBSNQ6UWP8 590 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 CPPED1Q9BRF8 314 aaPredicted RBP17.86■□□□□ 0.45
UPF1-201ENST00000262803 ULBP3Q9BZM4 244 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 KCMF1Q9P0J7 381 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 AK6Q9Y3D8 172 aaKnown RBP17.86■□□□□ 0.45
UPF1-201ENST00000262803 NUMA1Q14980 2115 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 LILRB5O75023 590 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 TACR1P25103 407 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 SSTR4P31391 388 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 RPL22L1Q6P5R6 122 aaKnown RBP17.86■□□□□ 0.45
UPF1-201ENST00000262803 IP6K3Q96PC2 410 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 ZNF286AQ9HBT8 521 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 H7C1Q1 480 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 SHOXO15266 292 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 APOC3P02656 99 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 IL3RAP26951 378 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 DEDD2Q8WXF8 326 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 PIGQQ9BRB3 760 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 OR52D1Q9H346 318 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 C1GALT1Q9NS00 363 aa17.86■□□□□ 0.45
UPF1-201ENST00000262803 TMEM184BQ9Y519 407 aaPredicted RBP17.86■□□□□ 0.45
UPF1-201ENST00000262803 NPIPA5A0A0B4J1W7 369 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 NPIPA7E9PJI5 369 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 TSPAN15O95858 294 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 NPIPA8P0DM63 369 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 DBPQ10586 325 aaPredicted RBP17.85■□□□□ 0.45
UPF1-201ENST00000262803 SPCS2Q15005 226 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 FAM78AQ5JUQ0 283 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 PODNL1Q6PEZ8 512 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 PLPP6Q8IY26 295 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 TMEM102Q8N9M5 508 aaPredicted RBP17.85■□□□□ 0.45
UPF1-201ENST00000262803 NLGN4YQ8NFZ3 816 aaPredicted RBP17.85■□□□□ 0.45
UPF1-201ENST00000262803 OR51Q1Q8NH59 317 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 SYNPO2LQ9H987 977 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 CORINQ9Y5Q5 1042 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 V9GY05 133 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 C4BP0C0L5 1744 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 C1SP09871 688 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 KIAA1024LP59773 190 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 SLC46A1Q96NT5 459 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 OR14A2Q96R54 314 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 NAA50Q9GZZ1 169 aaKnown RBP17.85■□□□□ 0.45
UPF1-201ENST00000262803 DDX31Q9H8H2 851 aaKnown RBP17.85■□□□□ 0.45
UPF1-201ENST00000262803 HCSTQ9UBK5 93 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 METTL15A6NJ78 407 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 NUDT7P0C024 238 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 HLA-FP30511 346 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 OR1Q1Q15612 314 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 ZNF322Q6U7Q0 402 aaPredicted RBP17.85■□□□□ 0.45
UPF1-201ENST00000262803 NT5C3BQ969T7 300 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 ZNF649Q9BS31 505 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 KLRC4-KLRK1H3BQV0 150 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 MMP12P39900 470 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 TAS2R19P59542 299 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 KCNJ10P78508 379 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 EID2Q8N6I1 236 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 CNEP1R1Q8N9A8 125 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 BRIX1Q8TDN6 353 aaKnown RBP17.85■□□□□ 0.45
UPF1-201ENST00000262803 GGHQ92820 318 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 ZNF583Q96ND8 569 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 ADOQ96SZ5 270 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 OBP2BQ9NPH6 170 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 LRFN1Q9P244 771 aa17.85■□□□□ 0.45
UPF1-201ENST00000262803 CACNG2Q9Y698 323 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms